| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547676
Identifier: 17547676
GI number: 17547676
Start: 3186145
End: 3186492
Strand: Reverse
Name: 17547676
Synonym: RSc2957
Alternate gene names: NA
Gene position: 3186492-3186145 (Counterclockwise)
Preceding gene: 17547677
Following gene: 17547675
Centisome position: 85.74
GC content: 70.4
Gene sequence:
>348_bases TTGCGGCCGCTGTTTCTTTTTCTGCTCCCGCCCATGCTGACCCTGTCCGGCCCGCTGACTCACCGCGAAGCGCCGCGCGT TCTGCGCGAGGGCGAGGCGCAGCTCGGCCAGGCACGCCAGGTCGGTACCGCCGCTGTGCGGGTCGATTGCGCCGGCTTGT CGCAGGTCGACTCCTCCGCGCTGGCGGTGCTGCTGTCGTGGCAGCGCACGGCGCAGGCTGCCGGCATCGCGTTGGATATC ACCGCGGCCCCCGAGGCGCTGCGCAATCTCGCCACGCTGTATGGCGTCGACACCCTGCTGGCGGTTGCACCGGCCACCAC GGCATCCCATCACCCGGCACGACATTGA
Upstream 100 bases:
>100_bases CGTGAGCGGTCTGGTGCAGTTCCTGGACGAGCGCAATGCCCAACTGGCGAAGGGGCCGGCAAAGTAAGCCGATCTCCGGT AGAATCCACACAGCGGTCGA
Downstream 100 bases:
>100_bases GGCGGCGTCCGGTGCGGGGCGGTCTTCCCCACATCGCGATGCCGCGCTCCGGCCATGAGCCGCGCGCTCGTGGCAACCCC GGTCCGGCGCCGCAAGCCGT
Product: signal peptide protein
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MRPLFLFLLPPMLTLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQAAGIALDI TAAPEALRNLATLYGVDTLLAVAPATTASHHPARH
Sequences:
>Translated_115_residues MRPLFLFLLPPMLTLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQAAGIALDI TAAPEALRNLATLYGVDTLLAVAPATTASHHPARH >Mature_115_residues MRPLFLFLLPPMLTLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSALAVLLSWQRTAQAAGIALDI TAAPEALRNLATLYGVDTLLAVAPATTASHHPARH
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12112; Mature: 12112
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLFLFLLPPMLTLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSA CCCEEHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHEEEEECCCCCHHHHHH LAVLLSWQRTAQAAGIALDITAAPEALRNLATLYGVDTLLAVAPATTASHHPARH HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRPLFLFLLPPMLTLSGPLTHREAPRVLREGEAQLGQARQVGTAAVRVDCAGLSQVDSSA CCCEEHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHEEEEECCCCCHHHHHH LAVLLSWQRTAQAAGIALDITAAPEALRNLATLYGVDTLLAVAPATTASHHPARH HHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA