| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is hisC1
Identifier: 17547670
GI number: 17547670
Start: 3179325
End: 3180449
Strand: Reverse
Name: hisC1
Synonym: RSc2951
Alternate gene names: 17547670
Gene position: 3180449-3179325 (Counterclockwise)
Preceding gene: 17547671
Following gene: 17547669
Centisome position: 85.58
GC content: 68.0
Gene sequence:
>1125_bases ATGAACGCCAACGCACCTGTCCAGCCCTCTCTCGATGACCTGCTCGGCCGCATCGTGCGCGACGATGTGCGCGCGATGGG CGCGTACCACGTGCCCGACGCCTCCGGCATGGTCAAGCTGGACGCGATGGAGAACCCCTACCATCTGCCGGCCATGCTGC GCGACGCGCTCGGCAAGCGGCTGGCCGAGGTGGCGCTGAACCGCTACCCGGTGCCCACCGCCGACGCGCTCAAGGCCCAG CTCAAGCGCGTGATGCGCGTGCCGGCCGGCGCCGACGTGCTGCTGGGCAACGGCTCGGACGAGATCATCAGCCTGATCGC TATCGCCGCGGCCAAGCCCGGCGCGACCGTGCTGGCGCCGGTGCCGGGCTTCGTGATGTATGCGATGTCGGCGCAGCTGA TGGGGCTGAAGTTCGTGGGCGTGCCGCTCAGGGCCGATCTCACCCTCGACCGCGAAGCGATGCTGGCCGCCATGGCTGAG CACCAGCCCGCCGTCATCTACCTGGCCTATCCGAACAACCCGACCGGCAACCTGTTCGACGCGGCCGACATGGATGCGCT CCTCCGCGCCGCGCGCGGGCCGGTGTGCCAGAGCCTGGTGGTGGTCGACGAGGCCTATCAGCCGTTTGCCCAGCACAGCT GGATGCCGCGCCTGCCCGAGTTCGACCACCTGCTGGTGATGCGCACTGTCTCCAAGCTGGGCCTGGCGGGCATCCGCCTG GGCTACGTGGCCGGCCACCCGAAGTGGATCGCCGAGCTCGACAAGGTGCGCCCGCCGTACAACGTGAACGTGCTGACCGA AGCCACCGCCGCGTTCGTGCTCGACCACGTGGACGTGCTCGATGCCCAGGCAGCGACCCTGCGTGCCGAGCGTACCCGGC TGATCGATGCGCTGTCTGCCCAGCCGGGCGTGACGGTGTTCCCGAGCGCCGCCAATTTCCTGCTGCTGCGCGTGCCCGAT GCCGCCGGCCTGTTCGAGCGCTTGCTCAAACGGCGGGTCCTGGTCAAAAACGTCAGTAAAATGCACCCGTTGCTGGCCAA CTGTCTGCGCGTGACGGTCAGCAACCCCGAAGAAAACGCGCAATTTCTTGATGCCTTTGCCGCATCGCTGCAGGACACCC CATGA
Upstream 100 bases:
>100_bases GCCTCCGAACTGGCCTACGGCGAGGGGTTGCAGGCGCATGCCCGCAGCGCTGAATACCGCCTGCAGCGCACCACCACCGA GTGATCCGATCCGCATGACC
Downstream 100 bases:
>100_bases GCCGCCGCGCCGAGGTCACTCGCAACACCTCCGAAACGCAGATCCGCGTCGCCCTTGATCTGGACGGCACGGGCAAGCAG ACGCTGAATACCGGCGTTCC
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNANAPVQPSLDDLLGRIVRDDVRAMGAYHVPDASGMVKLDAMENPYHLPAMLRDALGKRLAEVALNRYPVPTADALKAQ LKRVMRVPAGADVLLGNGSDEIISLIAIAAAKPGATVLAPVPGFVMYAMSAQLMGLKFVGVPLRADLTLDREAMLAAMAE HQPAVIYLAYPNNPTGNLFDAADMDALLRAARGPVCQSLVVVDEAYQPFAQHSWMPRLPEFDHLLVMRTVSKLGLAGIRL GYVAGHPKWIAELDKVRPPYNVNVLTEATAAFVLDHVDVLDAQAATLRAERTRLIDALSAQPGVTVFPSAANFLLLRVPD AAGLFERLLKRRVLVKNVSKMHPLLANCLRVTVSNPEENAQFLDAFAASLQDTP
Sequences:
>Translated_374_residues MNANAPVQPSLDDLLGRIVRDDVRAMGAYHVPDASGMVKLDAMENPYHLPAMLRDALGKRLAEVALNRYPVPTADALKAQ LKRVMRVPAGADVLLGNGSDEIISLIAIAAAKPGATVLAPVPGFVMYAMSAQLMGLKFVGVPLRADLTLDREAMLAAMAE HQPAVIYLAYPNNPTGNLFDAADMDALLRAARGPVCQSLVVVDEAYQPFAQHSWMPRLPEFDHLLVMRTVSKLGLAGIRL GYVAGHPKWIAELDKVRPPYNVNVLTEATAAFVLDHVDVLDAQAATLRAERTRLIDALSAQPGVTVFPSAANFLLLRVPD AAGLFERLLKRRVLVKNVSKMHPLLANCLRVTVSNPEENAQFLDAFAASLQDTP >Mature_374_residues MNANAPVQPSLDDLLGRIVRDDVRAMGAYHVPDASGMVKLDAMENPYHLPAMLRDALGKRLAEVALNRYPVPTADALKAQ LKRVMRVPAGADVLLGNGSDEIISLIAIAAAKPGATVLAPVPGFVMYAMSAQLMGLKFVGVPLRADLTLDREAMLAAMAE HQPAVIYLAYPNNPTGNLFDAADMDALLRAARGPVCQSLVVVDEAYQPFAQHSWMPRLPEFDHLLVMRTVSKLGLAGIRL GYVAGHPKWIAELDKVRPPYNVNVLTEATAAFVLDHVDVLDAQAATLRAERTRLIDALSAQPGVTVFPSAANFLLLRVPD AAGLFERLLKRRVLVKNVSKMHPLLANCLRVTVSNPEENAQFLDAFAASLQDTP
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=361, Percent_Identity=32.1329639889197, Blast_Score=144, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6322075, Length=386, Percent_Identity=29.0155440414508, Blast_Score=115, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS81_RALSO (Q8XV80)
Other databases:
- EMBL: AL646052 - RefSeq: NP_521072.1 - ProteinModelPortal: Q8XV80 - SMR: Q8XV80 - GeneID: 1221805 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2951 - NMPDR: fig|267608.1.peg.2951 - HOGENOM: HBG646350 - OMA: MDEAYQP - ProtClustDB: PRK04870 - BioCyc: RSOL267608:RSC2951-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40442; Mature: 40442
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANAPVQPSLDDLLGRIVRDDVRAMGAYHVPDASGMVKLDAMENPYHLPAMLRDALGKR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LAEVALNRYPVPTADALKAQLKRVMRVPAGADVLLGNGSDEIISLIAIAAAKPGATVLAP HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEC VPGFVMYAMSAQLMGLKFVGVPLRADLTLDREAMLAAMAEHQPAVIYLAYPNNPTGNLFD CCHHHHHHHHHHHHCEEEECCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC AADMDALLRAARGPVCQSLVVVDEAYQPFAQHSWMPRLPEFDHLLVMRTVSKLGLAGIRL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHEEE GYVAGHPKWIAELDKVRPPYNVNVLTEATAAFVLDHVDVLDAQAATLRAERTRLIDALSA EEECCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPGVTVFPSAANFLLLRVPDAAGLFERLLKRRVLVKNVSKMHPLLANCLRVTVSNPEENA CCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH QFLDAFAASLQDTP HHHHHHHHHHCCCC >Mature Secondary Structure MNANAPVQPSLDDLLGRIVRDDVRAMGAYHVPDASGMVKLDAMENPYHLPAMLRDALGKR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH LAEVALNRYPVPTADALKAQLKRVMRVPAGADVLLGNGSDEIISLIAIAAAKPGATVLAP HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEC VPGFVMYAMSAQLMGLKFVGVPLRADLTLDREAMLAAMAEHQPAVIYLAYPNNPTGNLFD CCHHHHHHHHHHHHCEEEECCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC AADMDALLRAARGPVCQSLVVVDEAYQPFAQHSWMPRLPEFDHLLVMRTVSKLGLAGIRL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHEEE GYVAGHPKWIAELDKVRPPYNVNVLTEATAAFVLDHVDVLDAQAATLRAERTRLIDALSA EEECCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QPGVTVFPSAANFLLLRVPDAAGLFERLLKRRVLVKNVSKMHPLLANCLRVTVSNPEENA CCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH QFLDAFAASLQDTP HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852