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The map label for this gene is sspB [H]

Identifier: 17547644

GI number: 17547644

Start: 3156399

End: 3156896

Strand: Reverse

Name: sspB [H]

Synonym: RSc2925

Alternate gene names: 17547644

Gene position: 3156896-3156399 (Counterclockwise)

Preceding gene: 17547645

Following gene: 17547642

Centisome position: 84.94

GC content: 64.66

Gene sequence:

>498_bases
ATGTCGGAAACTTCAACCAAGCCCTATCTGATCCGGGCCATCTACGAATGGTGCACGGACAACGGCTTCACGCCGTACAT
CGCCGTGTTCGTCGACAACAGTACCAACGTGCCCCGAGAGTTCGTCAAGAACGACGAGATCGTGCTGAACGTCAGCTTTG
ATGCGACCAGCCAGCTCGATATGGGCAATGAGTGGATCTCCTTCCACGCGCGCTTCTCGGGCGTCTCGCGCAAGATCGAG
GTGCCGGTCGACAACGTGCTCGCCGTGTACGCGCGCGAGAACGGGCAGGGCATGGCATTCCCCGTCGAACGCAGCACGCC
GCCCGCGCAGGCTGCGACCGAACGCGAGAACAGCCCGCCGCCCAAGCTGTCGGCGGTGGAGTCCGAAGCCGCGCCGGAGC
CGGCCACCGCCGAAACGCAGGGCGGTTCCGACGACGAGCCCACGCCGCCCAGCGTGCCGCGTATCGGAGGCAAGCCGTCG
CTGAAGGTCGTCAAGTAA

Upstream 100 bases:

>100_bases
ATTGAAGCGCTGACGCCGTCGGAAAAGGTGATGCGTCGCTGATTACCGCCGGGCACGGTCGCGGTCTTTGCGGCTGCGCC
CATCGGTTACTCTTTTCATC

Downstream 100 bases:

>100_bases
GGCGGCTTACGGTAGAATCGCGGATCTTTGCCGGCTTAGCTCATCAGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCG
GGTTCGAGTCCTGCAGCCGG

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDNSTNVPREFVKNDEIVLNVSFDATSQLDMGNEWISFHARFSGVSRKIE
VPVDNVLAVYARENGQGMAFPVERSTPPAQAATERENSPPPKLSAVESEAAPEPATAETQGGSDDEPTPPSVPRIGGKPS
LKVVK

Sequences:

>Translated_165_residues
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDNSTNVPREFVKNDEIVLNVSFDATSQLDMGNEWISFHARFSGVSRKIE
VPVDNVLAVYARENGQGMAFPVERSTPPAQAATERENSPPPKLSAVESEAAPEPATAETQGGSDDEPTPPSVPRIGGKPS
LKVVK
>Mature_164_residues
SETSTKPYLIRAIYEWCTDNGFTPYIAVFVDNSTNVPREFVKNDEIVLNVSFDATSQLDMGNEWISFHARFSGVSRKIEV
PVDNVLAVYARENGQGMAFPVERSTPPAQAATERENSPPPKLSAVESEAAPEPATAETQGGSDDEPTPPSVPRIGGKPSL
KVVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=98, Percent_Identity=44.8979591836735, Blast_Score=97, Evalue=7e-22,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 17957; Mature: 17826

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSTKPYLIRAIYEWCTDNGFTPYIAVFVDNSTNVPREFVKNDEIVLNVSFDATSQLD
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWISFHARFSGVSRKIEVPVDNVLAVYARENGQGMAFPVERSTPPAQAATERENSPP
CCCCEEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLSAVESEAAPEPATAETQGGSDDEPTPPSVPRIGGKPSLKVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SETSTKPYLIRAIYEWCTDNGFTPYIAVFVDNSTNVPREFVKNDEIVLNVSFDATSQLD
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCC
MGNEWISFHARFSGVSRKIEVPVDNVLAVYARENGQGMAFPVERSTPPAQAATERENSPP
CCCCEEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCCCCC
PKLSAVESEAAPEPATAETQGGSDDEPTPPSVPRIGGKPSLKVVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]