| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547616
Identifier: 17547616
GI number: 17547616
Start: 3124601
End: 3124969
Strand: Reverse
Name: 17547616
Synonym: RSc2897
Alternate gene names: NA
Gene position: 3124969-3124601 (Counterclockwise)
Preceding gene: 17547618
Following gene: 17547612
Centisome position: 84.09
GC content: 70.73
Gene sequence:
>369_bases ATGTCCAGGACCCTCGCCACCCCCCGCACGCCGCAAGGCAACGACAGCCTGTTCGCCAGCTATGAGGCCATTGCCAGCCT GTCGACGGAGATGGTCGAGGCGGCCGAGGCCGGGGACTGGGCGGGCGTGAGCGCCCTGGAGCGCGAGTGCGCACTCTATA TGGAGCGGCTCGGCCGCACGCCGTCGCGTCCGGTGCTGTCCGAGGCGGAGCTTCGGCGCAAGCGCGACCTGATGATGCGC ATCCTGGCCAACGACGCCCGTGTCCGGGCGCTGGTCTGCCCGCGCCAGGACCAGCTGCTGCGTCCCATGGATGCCGCGCG CCGTTCGATCGGCGCCCGCCAGGCCTACGCCGCCGTTTCCTACTATTGA
Upstream 100 bases:
>100_bases GCTTGCGGCGGATGGGGCGGGCAGCGGGCATACCCATTGCCTAGCGTTCCCCAGGCGCATCCTCGATCCACGCCGTTTGA ACCTGAAATCGGAGTGCAGC
Downstream 100 bases:
>100_bases GACCCGCGGCTGCGGCACGGCCGTTTCTTCACGGCTTCACTGCCCGGGCTTCAGTTCGCCCCACGTCACCAGCACGCGCT GGATGCTGCGCGCATAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Flagellar Protein FliT; Flagellar Protein Flit
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRTPSRPVLSEAELRRKRDLMMR ILANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVSYY
Sequences:
>Translated_122_residues MSRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRTPSRPVLSEAELRRKRDLMMR ILANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVSYY >Mature_121_residues SRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRTPSRPVLSEAELRRKRDLMMRI LANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVSYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13609; Mature: 13478
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PSRPVLSEAELRRKRDLMMRILANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVS CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHC YY CC >Mature Secondary Structure SRTLATPRTPQGNDSLFASYEAIASLSTEMVEAAEAGDWAGVSALERECALYMERLGRT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PSRPVLSEAELRRKRDLMMRILANDARVRALVCPRQDQLLRPMDAARRSIGARQAYAAVS CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHC YY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA