| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is trpE [H]
Identifier: 17547600
GI number: 17547600
Start: 3108946
End: 3110475
Strand: Direct
Name: trpE [H]
Synonym: RSc2881
Alternate gene names: 17547600
Gene position: 3108946-3110475 (Clockwise)
Preceding gene: 17547599
Following gene: 17547601
Centisome position: 83.65
GC content: 67.91
Gene sequence:
>1530_bases ATGACCGAACTCGAATTCAAATCGCTGGCCGACCAGGGCTACAACCGCATCCCGCTGATCGCCGAGGCGCTGGCCGACCT GGAGACGCCGCTCTCGCTGTACCTGAAGCTGGCGCAATCGCACGACCGCGGCACGCACACCTTCCTGCTGGAATCCGTGG TGGGCGGCGAGCGCTTCGGGCGCTATTCCTTCATCGGCCTGCATGCGCGCACGCTGCTGCGCACCACCGGCCACCGCACC GAGGTCGTCACCGACGGCCAGGTGGTCGAAACGCATGACGGCAATCCGCTGGAATTCATCGCCGCCTTCGAGCAACGCCA CAAGATCGCGCTGCGCCCGGGCCTGCCGCGGTTCTGCGGCGGCCTGGCCGGCTATTTCGGCTACGACGCCGTGCGCTACA TCGAGCCGCGCCTGACCGACACCGCGCCGCCCGATGACCTGCAGTTGCCCGACATCCAGCTGATGCTGTGCGAAGAGCTG GCCGTGATCGACAACCTGTCGGGCAAGCTCTACCTGATCGTCTATGCCGATCCGTCCAAGCCCGAGGCTTATCCGCGCGC CAGGCAGCGCCTGCGCGAACTGCGCGCCAAGCTGCGGCATCCGGTGGACGTGCCGGTGACCTCGCCGTCGGTGCGCACGG ACATCGTGCGGGAATTCGACAAGGCGGACTACATCACCGCGGTGCTCAAGGCCAAGGAGTACATCGCGGCGGGCGATATG ATGCAGGTGCAGGTCGGCCAGCGCCTGGTCAAGCCGTTCCGCGACGCGCCGCTGTCGCTGTACCGCGCGCTGCGCTCGCT GAACCCGTCGCCCTATATGTACTTCTACAACTTCGGCGACATGCAGATCGTCGGGGCCTCGCCGGAGATCCTGGTGCGCC AGGAAGAGCGCCGCGTGCCGGCCGGCGCGAACGGCAACGGCGCGGAGGAATCCGCCCGCATCGTGACGATCCGCCCGCTG GCGGGCACCCGCCCGCGCGGCAGCACGCCCGAGCGCGACGCGGAACTGGCCACCGAGCTGCTCAACGACCCGAAGGAGAT CGCCGAGCACGTCATGCTGATCGACCTGGCGCGCAATGACATCGGCCGCATCGCCGAGATCGGCTCGGTCAAGGTGACCG ACCAGATGGTCATCGAGAAGTATTCGCACGTGCAGCACATCGTCAGCTCGGTCGAGGGGCGCCTGAAGCCCGGCATGACC AATATGGACGTGCTGCGCGCCACCTTCCCCGCAGGCACGCTGTCGGGCGCGCCCAAGGTGCGGGCGATGGAGATCATCGA CGAGCTGGAGCCGGTCAAGCGCGGCATCTACGGCGGCGCGGTGGGCTACCTGTCGTTCTCGGGCGAGATGGACCTGGCGA TCGCCATCCGCACCGGCATCATCAAGGACGGCAACCTGTACGTGCAGGCCGCCGCCGGCGTGGTGGCCGATTCCGACCCG GATGCCGAATGGCGCGAGACCGAACACAAGGCGCGCGCCGTGCTGCGCGCCGCCGAGCAGGTCCAGGACGGCCTGGACGC CGATTTCTGA
Upstream 100 bases:
>100_bases TGTTCTGCTAACGTTCCGTCGGCGCAACCGCGCTTGCCGTGGAGCGAAACGCATGCCGGCCGTGGCTTTCCGCCCGTCCG GCGAACCGACCTGACCGCTC
Downstream 100 bases:
>100_bases CAGGCAAGGAGCCCAACATGCTGCTGATGATCGACAACTACGACTCCTTCACCTACAACATCGTCCAGTACTTCGGCGAG CTCGGCCAGGACGTGCGCAC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTELEFKSLADQGYNRIPLIAEALADLETPLSLYLKLAQSHDRGTHTFLLESVVGGERFGRYSFIGLHARTLLRTTGHRT EVVTDGQVVETHDGNPLEFIAAFEQRHKIALRPGLPRFCGGLAGYFGYDAVRYIEPRLTDTAPPDDLQLPDIQLMLCEEL AVIDNLSGKLYLIVYADPSKPEAYPRARQRLRELRAKLRHPVDVPVTSPSVRTDIVREFDKADYITAVLKAKEYIAAGDM MQVQVGQRLVKPFRDAPLSLYRALRSLNPSPYMYFYNFGDMQIVGASPEILVRQEERRVPAGANGNGAEESARIVTIRPL AGTRPRGSTPERDAELATELLNDPKEIAEHVMLIDLARNDIGRIAEIGSVKVTDQMVIEKYSHVQHIVSSVEGRLKPGMT NMDVLRATFPAGTLSGAPKVRAMEIIDELEPVKRGIYGGAVGYLSFSGEMDLAIAIRTGIIKDGNLYVQAAAGVVADSDP DAEWRETEHKARAVLRAAEQVQDGLDADF
Sequences:
>Translated_509_residues MTELEFKSLADQGYNRIPLIAEALADLETPLSLYLKLAQSHDRGTHTFLLESVVGGERFGRYSFIGLHARTLLRTTGHRT EVVTDGQVVETHDGNPLEFIAAFEQRHKIALRPGLPRFCGGLAGYFGYDAVRYIEPRLTDTAPPDDLQLPDIQLMLCEEL AVIDNLSGKLYLIVYADPSKPEAYPRARQRLRELRAKLRHPVDVPVTSPSVRTDIVREFDKADYITAVLKAKEYIAAGDM MQVQVGQRLVKPFRDAPLSLYRALRSLNPSPYMYFYNFGDMQIVGASPEILVRQEERRVPAGANGNGAEESARIVTIRPL AGTRPRGSTPERDAELATELLNDPKEIAEHVMLIDLARNDIGRIAEIGSVKVTDQMVIEKYSHVQHIVSSVEGRLKPGMT NMDVLRATFPAGTLSGAPKVRAMEIIDELEPVKRGIYGGAVGYLSFSGEMDLAIAIRTGIIKDGNLYVQAAAGVVADSDP DAEWRETEHKARAVLRAAEQVQDGLDADF >Mature_508_residues TELEFKSLADQGYNRIPLIAEALADLETPLSLYLKLAQSHDRGTHTFLLESVVGGERFGRYSFIGLHARTLLRTTGHRTE VVTDGQVVETHDGNPLEFIAAFEQRHKIALRPGLPRFCGGLAGYFGYDAVRYIEPRLTDTAPPDDLQLPDIQLMLCEELA VIDNLSGKLYLIVYADPSKPEAYPRARQRLRELRAKLRHPVDVPVTSPSVRTDIVREFDKADYITAVLKAKEYIAAGDMM QVQVGQRLVKPFRDAPLSLYRALRSLNPSPYMYFYNFGDMQIVGASPEILVRQEERRVPAGANGNGAEESARIVTIRPLA GTRPRGSTPERDAELATELLNDPKEIAEHVMLIDLARNDIGRIAEIGSVKVTDQMVIEKYSHVQHIVSSVEGRLKPGMTN MDVLRATFPAGTLSGAPKVRAMEIIDELEPVKRGIYGGAVGYLSFSGEMDLAIAIRTGIIKDGNLYVQAAAGVVADSDPD AEWRETEHKARAVLRAAEQVQDGLDADF
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=390, Percent_Identity=38.4615384615385, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1788114, Length=460, Percent_Identity=32.1739130434783, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1786809, Length=237, Percent_Identity=26.5822784810127, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI87082077, Length=289, Percent_Identity=25.6055363321799, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=495, Percent_Identity=40.4040404040404, Blast_Score=314, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6324361, Length=512, Percent_Identity=25.9765625, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56333; Mature: 56202
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELEFKSLADQGYNRIPLIAEALADLETPLSLYLKLAQSHDRGTHTFLLESVVGGERFG CCCCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCC RYSFIGLHARTLLRTTGHRTEVVTDGQVVETHDGNPLEFIAAFEQRHKIALRPGLPRFCG CEEEEHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHHHHHHCCEEEECCCCHHHHH GLAGYFGYDAVRYIEPRLTDTAPPDDLQLPDIQLMLCEELAVIDNLSGKLYLIVYADPSK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC PEAYPRARQRLRELRAKLRHPVDVPVTSPSVRTDIVREFDKADYITAVLKAKEYIAAGDM CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MQVQVGQRLVKPFRDAPLSLYRALRSLNPSPYMYFYNFGDMQIVGASPEILVRQEERRVP HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEHHCCCC AGANGNGAEESARIVTIRPLAGTRPRGSTPERDAELATELLNDPKEIAEHVMLIDLARND CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IGRIAEIGSVKVTDQMVIEKYSHVQHIVSSVEGRLKPGMTNMDVLRATFPAGTLSGAPKV HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCH RAMEIIDELEPVKRGIYGGAVGYLSFSGEMDLAIAIRTGIIKDGNLYVQAAAGVVADSDP HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECEEECCCEEEEEECCEEECCCC DAEWRETEHKARAVLRAAEQVQDGLDADF CCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TELEFKSLADQGYNRIPLIAEALADLETPLSLYLKLAQSHDRGTHTFLLESVVGGERFG CCCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCC RYSFIGLHARTLLRTTGHRTEVVTDGQVVETHDGNPLEFIAAFEQRHKIALRPGLPRFCG CEEEEHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHHHHHHCCEEEECCCCHHHHH GLAGYFGYDAVRYIEPRLTDTAPPDDLQLPDIQLMLCEELAVIDNLSGKLYLIVYADPSK HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC PEAYPRARQRLRELRAKLRHPVDVPVTSPSVRTDIVREFDKADYITAVLKAKEYIAAGDM CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MQVQVGQRLVKPFRDAPLSLYRALRSLNPSPYMYFYNFGDMQIVGASPEILVRQEERRVP HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEHHCCCC AGANGNGAEESARIVTIRPLAGTRPRGSTPERDAELATELLNDPKEIAEHVMLIDLARND CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IGRIAEIGSVKVTDQMVIEKYSHVQHIVSSVEGRLKPGMTNMDVLRATFPAGTLSGAPKV HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCH RAMEIIDELEPVKRGIYGGAVGYLSFSGEMDLAIAIRTGIIKDGNLYVQAAAGVVADSDP HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECEEECCCEEEEEECCEEECCCC DAEWRETEHKARAVLRAAEQVQDGLDADF CCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10417653 [H]