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The map label for this gene is omp32 [H]

Identifier: 17547574

GI number: 17547574

Start: 3072456

End: 3073625

Strand: Direct

Name: omp32 [H]

Synonym: RSc2855

Alternate gene names: 17547574

Gene position: 3072456-3073625 (Clockwise)

Preceding gene: 17547555

Following gene: 17547575

Centisome position: 82.67

GC content: 65.04

Gene sequence:

>1170_bases
ATGAAGAAATCGCTGCTTGCGATGGCAGTGCTGGGCGCGTTTGCAGGTGCAGCGCATGCCCAATCCAGTGTGACGCTGTA
CGGTGTGGTCGACGCCAACGTCGAGTACGTCAACCATGAACAAAACGTGACATCGGCGGGGATCGCCATCCCGGGCAGCG
GATCGCGCGTGGCAATGCAGGCGGGCGGCCTGTCGTCCAACCGCTGGGGCCTGCGCGGCGTGGAAGACATCGGCGGCGGC
CTGAAGGGCCTGTTCGTGCTGGAATCCGGCTTCGGCATGGATACGGGCACGCTGCAGCAAGGTGGCCGCCTGTTCGGCCG
GCAGGCGTTCGTGGGCTTGCAGGGCAACTGGGGCAAGATCACGCTGGGCCGCCAGTACACCACGATCTTCGACATGATGG
CGAACTTCTCGCCGAGCGGCTATGCCACCCAGTACGAACCGGTGGTCGGCCTGCTGGGCCCGAACTTCCGCGAAGACAAC
GTGATCAAGTACACCGGCCTGTTCGGCCCGGTGACGGTCGAGGGCCACTGGGCATTCGGCGAACGCGCCGGCAGCCAGAC
GGCCAACTCGGCCTACGGCCTGGGCGCCAACTACTTCGCCGGTCCGTTCGGGCTCGGTGTCGCCTACGACGAAGTGAAGG
TGCTGACCGCGGCCGAAGCACTGGGCGGCGCCGGCAACGAGTACGCCCGCGACAAGCGCGCCGCCATTGCGGCCAGCTAT
ACGGTGGGCCCGGTCAAGCTGATGGGCGGCTACCGCTACGGCAAGACCGACACGGCATCGAGCGGCGCCACGCTCGCCCT
GCTGCCGCACCGCGACGACCTGTACTGGATCGGCGTGAACTACCAGGCGACGCCGGCCCTGGGCTTCACGCTGTCGTACT
ACTACGACAACATCAAGGAAGCGACCATCGGCACCACGACGGTCAATCCGCGCAAGCCGCAGCAGTTGAACTTCATCGCC
GATTACAACTTCTCCAAGCGTACCGACGTGTATTTCACGGCGGCCTATTCGCGCAATGCCTCGCTCAACTGGGACTCGAT
CGGTTATGCGACGACGGCGAGCGGGCAGTTGTCGATCGGTTACCTGCCGGCCGCTTCGCAGACGTACTTCATCACGCCGG
ATGCCAGCAACCAGCTGGGCGCGGCCATCGGTATCCGCCACAAGTTCTGA

Upstream 100 bases:

>100_bases
GTTTGAAAGTCGGCGGGCGGAAAGACGGGAATCGAGGGTCTGGGCCGCCTGCAAGAACCCGAAAAAGAGCAATTTCAAGA
GCACAATTGGAGGCCGACCG

Downstream 100 bases:

>100_bases
CGCGCGCGGTTTTCGTCCGCCCGCCTCTCTCATGGCGGACGCAGGAAGGCACCTCCGGGTGCCTTTTTGCATGGCGCGCC
GCCATGGCCGGGACTGCCGG

Product: outer membrane porin signal peptide protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKKSLLAMAVLGAFAGAAHAQSSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAMQAGGLSSNRWGLRGVEDIGGG
LKGLFVLESGFGMDTGTLQQGGRLFGRQAFVGLQGNWGKITLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNFREDN
VIKYTGLFGPVTVEGHWAFGERAGSQTANSAYGLGANYFAGPFGLGVAYDEVKVLTAAEALGGAGNEYARDKRAAIAASY
TVGPVKLMGGYRYGKTDTASSGATLALLPHRDDLYWIGVNYQATPALGFTLSYYYDNIKEATIGTTTVNPRKPQQLNFIA
DYNFSKRTDVYFTAAYSRNASLNWDSIGYATTASGQLSIGYLPAASQTYFITPDASNQLGAAIGIRHKF

Sequences:

>Translated_389_residues
MKKSLLAMAVLGAFAGAAHAQSSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAMQAGGLSSNRWGLRGVEDIGGG
LKGLFVLESGFGMDTGTLQQGGRLFGRQAFVGLQGNWGKITLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNFREDN
VIKYTGLFGPVTVEGHWAFGERAGSQTANSAYGLGANYFAGPFGLGVAYDEVKVLTAAEALGGAGNEYARDKRAAIAASY
TVGPVKLMGGYRYGKTDTASSGATLALLPHRDDLYWIGVNYQATPALGFTLSYYYDNIKEATIGTTTVNPRKPQQLNFIA
DYNFSKRTDVYFTAAYSRNASLNWDSIGYATTASGQLSIGYLPAASQTYFITPDASNQLGAAIGIRHKF
>Mature_389_residues
MKKSLLAMAVLGAFAGAAHAQSSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAMQAGGLSSNRWGLRGVEDIGGG
LKGLFVLESGFGMDTGTLQQGGRLFGRQAFVGLQGNWGKITLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNFREDN
VIKYTGLFGPVTVEGHWAFGERAGSQTANSAYGLGANYFAGPFGLGVAYDEVKVLTAAEALGGAGNEYARDKRAAIAASY
TVGPVKLMGGYRYGKTDTASSGATLALLPHRDDLYWIGVNYQATPALGFTLSYYYDNIKEATIGTTTVNPRKPQQLNFIA
DYNFSKRTDVYFTAAYSRNASLNWDSIGYATTASGQLSIGYLPAASQTYFITPDASNQLGAAIGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41295; Mature: 41295

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLAMAVLGAFAGAAHAQSSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAMQ
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEE
AGGLSSNRWGLRGVEDIGGGLKGLFVLESGFGMDTGTLQQGGRLFGRQAFVGLQGNWGKI
ECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHCCCEECCEEEEEECCCCCEE
TLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNFREDNVIKYTGLFGPVTVEGHWAFG
EECCCHHHHHHHHHCCCCCCCCEECCCEEEECCCCCCCCCEEEEECCCCCEEEEEEEECC
ERAGSQTANSAYGLGANYFAGPFGLGVAYDEVKVLTAAEALGGAGNEYARDKRAAIAASY
CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEEEHHHHHCCCCCHHHHHHHHEEEEEE
TVGPVKLMGGYRYGKTDTASSGATLALLPHRDDLYWIGVNYQATPALGFTLSYYYDNIKE
CCCCEEEECCEECCCCCCCCCCCEEEEEECCCCEEEEEECEEECCCCEEEEEEECCCCCC
ATIGTTTVNPRKPQQLNFIADYNFSKRTDVYFTAAYSRNASLNWDSIGYATTASGQLSIG
CEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCEEEEE
YLPAASQTYFITPDASNQLGAAIGIRHKF
EECCCCCEEEECCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKSLLAMAVLGAFAGAAHAQSSVTLYGVVDANVEYVNHEQNVTSAGIAIPGSGSRVAMQ
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCEEECCCCCEEEEE
AGGLSSNRWGLRGVEDIGGGLKGLFVLESGFGMDTGTLQQGGRLFGRQAFVGLQGNWGKI
ECCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHCCCEECCEEEEEECCCCCEE
TLGRQYTTIFDMMANFSPSGYATQYEPVVGLLGPNFREDNVIKYTGLFGPVTVEGHWAFG
EECCCHHHHHHHHHCCCCCCCCEECCCEEEECCCCCCCCCEEEEECCCCCEEEEEEEECC
ERAGSQTANSAYGLGANYFAGPFGLGVAYDEVKVLTAAEALGGAGNEYARDKRAAIAASY
CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEEEEHHHHHCCCCCHHHHHHHHEEEEEE
TVGPVKLMGGYRYGKTDTASSGATLALLPHRDDLYWIGVNYQATPALGFTLSYYYDNIKE
CCCCEEEECCEECCCCCCCCCCCEEEEEECCCCEEEEEECEEECCCCEEEEEEECCCCCC
ATIGTTTVNPRKPQQLNFIADYNFSKRTDVYFTAAYSRNASLNWDSIGYATTASGQLSIG
CEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCEEEEE
YLPAASQTYFITPDASNQLGAAIGIRHKF
EECCCCCEEEECCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]