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The map label for this gene is coq7

Identifier: 17547573

GI number: 17547573

Start: 3071424

End: 3072059

Strand: Reverse

Name: coq7

Synonym: RSc2854

Alternate gene names: 17547573

Gene position: 3072059-3071424 (Counterclockwise)

Preceding gene: 17547576

Following gene: 17547572

Centisome position: 82.66

GC content: 70.6

Gene sequence:

>636_bases
ATGCTCGATCGCTTCCTTCCCGAATTCGACCGCGCCCTGCGCGCCGTGGCCGGCATCACCCGTGCCTCCCGCCCCAACCC
CGCCGATGCCATCGTCGCTCCCACCGATGACGGTGCGAAACTGTCCGACACCGAGCGCCGCCATGCCGCCGGGCTGATGC
GCGTCAACCACGTGGGCGAGGTGTGCGCCCAGGCGCTGTACCAGGGGCAGGCGCTGTTCGCGCGCGACCCGGCCATCCGC
GCCCAGCTCGATGAGGCCGCGCGCGAGGAAGAGGACCACCTCGCCTGGTGCGCCCAGCGCCTGCAGGAACTGCACGATCG
TCCGAGCCTGCTCAACCCGCTGTGGTACGCCGGCGCATTCGCCATCGGCGCGCTCGCCGGCCGCTTGGGCGACAAGATCA
GCCTCGGCTTCGTCGCCGAGACCGAGCGCCAGGTCGAGCATCACCTCGACGGCCATCTCGATCGCCTGCCCGAGCACGAT
GCCCGCTCCCGGGCCATCGTCGCCCAGATGCGCGATGACGAAGTCCGCCATGGCGACAATGCCCGCGCCGCCGGCGGCAT
CGATCTGCCGGAGCCGGTGCGCCAGGCCATGCGCTTGGCCTCACGCATTATGACCACCGCTGCCTACCGCATTTGA

Upstream 100 bases:

>100_bases
GGTCTGGTGCGTTCGCTTCTGAGCGGACGCAAAACAGCGAGCGGCGGGGCCCTTACAATGCTGGACGCGCCGTGCGCCTT
CGCCGCCGGCAGCCTTTCCT

Downstream 100 bases:

>100_bases
GGTAATTTTGTGCGCCTGTGTGGCGTACTGTCCACCATTTGGTGGAGCCATCCAAAATGCCCTTCCGGCCCGCTTCCCAC
AAGGGGATGCGGGACGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLDRFLPEFDRALRAVAGITRASRPNPADAIVAPTDDGAKLSDTERRHAAGLMRVNHVGEVCAQALYQGQALFARDPAIR
AQLDEAAREEEDHLAWCAQRLQELHDRPSLLNPLWYAGAFAIGALAGRLGDKISLGFVAETERQVEHHLDGHLDRLPEHD
ARSRAIVAQMRDDEVRHGDNARAAGGIDLPEPVRQAMRLASRIMTTAAYRI

Sequences:

>Translated_211_residues
MLDRFLPEFDRALRAVAGITRASRPNPADAIVAPTDDGAKLSDTERRHAAGLMRVNHVGEVCAQALYQGQALFARDPAIR
AQLDEAAREEEDHLAWCAQRLQELHDRPSLLNPLWYAGAFAIGALAGRLGDKISLGFVAETERQVEHHLDGHLDRLPEHD
ARSRAIVAQMRDDEVRHGDNARAAGGIDLPEPVRQAMRLASRIMTTAAYRI
>Mature_211_residues
MLDRFLPEFDRALRAVAGITRASRPNPADAIVAPTDDGAKLSDTERRHAAGLMRVNHVGEVCAQALYQGQALFARDPAIR
AQLDEAAREEEDHLAWCAQRLQELHDRPSLLNPLWYAGAFAIGALAGRLGDKISLGFVAETERQVEHHLDGHLDRLPEHD
ARSRAIVAQMRDDEVRHGDNARAAGGIDLPEPVRQAMRLASRIMTTAAYRI

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family

Homologues:

Organism=Homo sapiens, GI25453484, Length=152, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI300244542, Length=136, Percent_Identity=30.1470588235294, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24640215, Length=140, Percent_Identity=25.7142857142857, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COQ7_RALSO (Q8XVH7)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520975.1
- ProteinModelPortal:   Q8XVH7
- GeneID:   1221702
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2854
- NMPDR:   fig|267608.1.peg.2854
- HOGENOM:   HBG289195
- OMA:   YQGQALT
- ProtClustDB:   CLSK866016
- BioCyc:   RSOL267608:RSC2854-MONOMER
- HAMAP:   MF_01658
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566
- Gene3D:   G3DSA:1.20.1260.10
- PANTHER:   PTHR11237

Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like

EC number: 1.14.13.-

Molecular weight: Translated: 23320; Mature: 23320

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRFLPEFDRALRAVAGITRASRPNPADAIVAPTDDGAKLSDTERRHAAGLMRVNHVGE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
VCAQALYQGQALFARDPAIRAQLDEAAREEEDHLAWCAQRLQELHDRPSLLNPLWYAGAF
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AIGALAGRLGDKISLGFVAETERQVEHHLDGHLDRLPEHDARSRAIVAQMRDDEVRHGDN
HHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
ARAAGGIDLPEPVRQAMRLASRIMTTAAYRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDRFLPEFDRALRAVAGITRASRPNPADAIVAPTDDGAKLSDTERRHAAGLMRVNHVGE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
VCAQALYQGQALFARDPAIRAQLDEAAREEEDHLAWCAQRLQELHDRPSLLNPLWYAGAF
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AIGALAGRLGDKISLGFVAETERQVEHHLDGHLDRLPEHDARSRAIVAQMRDDEVRHGDN
HHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
ARAAGGIDLPEPVRQAMRLASRIMTTAAYRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852