Click here to switch to the map view.

The map label for this gene is yvrE [H]

Identifier: 17547474

GI number: 17547474

Start: 2966408

End: 2967319

Strand: Reverse

Name: yvrE [H]

Synonym: RSc2755

Alternate gene names: 17547474

Gene position: 2967319-2966408 (Counterclockwise)

Preceding gene: 17547475

Following gene: 17547473

Centisome position: 79.84

GC content: 73.03

Gene sequence:

>912_bases
ATGATTGCAATCCCGCTCTCCGACCTGCGCTGCACGCTCGGCGAAGGCATCGTCTGGGACGATGCCCTGGGTGTGCTGTG
GTGGACCGACATCCAGGAATCGCTGCTGTGGCAGCACGACCCGGCCACCGGCCGCGAGCGCCAGTGGCCGATGCCGCAGC
GCGTGGGCTCGTTCGTGCTGACGGCGACGCCGGGCGTGCTGATCGTCGGCCTGGCCAAGCAGGTCGCCCGCTTCGACGCG
CGCACCGGCGCGCTGACGCCGCTGGTCGACGTGGAAGCCGGCAACCCGGCCACGCGCATCAACGACGGCCGCGCCGACCG
GGCCGGCAACTACGTCTTCGGCACCCTGCACGAGGGCGGCCCGCAGGCGCTGGGCAGCTTCTACCGCTTCACGCCGCTGG
GCGTGCTGCAGCGGCTGGCCCTGCCCGGCATCGCGATCGCCAACAGCATCGCCTTCAGCCCCGAGGGCACGACGATGTAC
TGGTGCGACACCCCCAGCCGCCGCATCCACGCCTGCGACTACGACGGCCAGACCGGCACGGTCGCCCGCGTGCGCGTCTT
CGCCGATCTGCGCGACGCGGATGCCGGCACCGCCCACCGGGGTTCGCCCGATGGCTCGACCGTCGATGCCGACGGCTGCC
TGTGGAACGCCGAGTGGGGCGGCAACCGTGTCACGCGCTATGCGCCGGACGGCCGCGTGCTGGCGCACCACCCGGTGCCC
GCATCGCAGCCGACCTGCCCGGCGTTCGGCGGCGCGGCGCTCGATACGCTCTACCTGGCCAGCGCCCGCGACGGATTGTC
GGCGCGACGGCTGGCCGAGGACGTGCTGGCCGGTGCCGTGTTCCGGCTCGCGGTCGGCGGCGTGCGCGGTTTGCCCGAGG
CGCGGTTCGGCGATGCCTGTATTCCGGCTTGA

Upstream 100 bases:

>100_bases
GCGTTCTATCAGTACCTGGTGCGCGGCGGCATCCTGCTGGCGGCGGTGCTGGTGGACCAGATCAAGCATCGCGGCGGCCG
CGATTGAGGCAGGGGACACC

Downstream 100 bases:

>100_bases
CAATGGCGTGCTGCGCGCCGACGTGCTGCCCGGCGCGGGCGGCGGCCTGCTGCGCTTCGACGCCTGGCGCGACGGCGGGC
CGGTGCCGGTGTTCCGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVLTATPGVLIVGLAKQVARFDA
RTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGGPQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMY
WCDTPSRRIHACDYDGQTGTVARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDACIPA

Sequences:

>Translated_303_residues
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVLTATPGVLIVGLAKQVARFDA
RTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGGPQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMY
WCDTPSRRIHACDYDGQTGTVARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDACIPA
>Mature_303_residues
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVLTATPGVLIVGLAKQVARFDA
RTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGGPQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMY
WCDTPSRRIHACDYDGQTGTVARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDACIPA

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=288, Percent_Identity=28.125, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI4759036, Length=288, Percent_Identity=28.125, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45551448, Length=271, Percent_Identity=28.4132841328413, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24641471, Length=271, Percent_Identity=28.4132841328413, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI18860103, Length=271, Percent_Identity=28.4132841328413, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24641469, Length=271, Percent_Identity=28.4132841328413, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646912, Length=273, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24646910, Length=273, Percent_Identity=28.2051282051282, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32258; Mature: 32258

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVL
CEECCCHHHHHHHCCCEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEE
TATPGVLIVGLAKQVARFDARTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGG
ECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
PQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMYWCDTPSRRIHACDYDGQTGT
HHHHHHHHHCCHHHHHHHHHCCCHHHHCCEEECCCCCEEEEECCCCCEEEEECCCCCCCC
VARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
EEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCEEEEECCCCCEEEECCCC
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDAC
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IPA
CCC
>Mature Secondary Structure
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVL
CEECCCHHHHHHHCCCEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHCCEEE
TATPGVLIVGLAKQVARFDARTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGG
ECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
PQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMYWCDTPSRRIHACDYDGQTGT
HHHHHHHHHCCHHHHHHHHHCCCHHHHCCEEECCCCCEEEEECCCCCEEEEECCCCCCCC
VARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
EEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCEEEEECCCCCEEEECCCC
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDAC
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]