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The map label for this gene is 17547444

Identifier: 17547444

GI number: 17547444

Start: 2931432

End: 2931905

Strand: Reverse

Name: 17547444

Synonym: RSc2725

Alternate gene names: NA

Gene position: 2931905-2931432 (Counterclockwise)

Preceding gene: 17547447

Following gene: 17547443

Centisome position: 78.89

GC content: 67.93

Gene sequence:

>474_bases
ATGTCGGCAGTCATCGACGATCCGGTGTACGCGGGCCTGACCGGGGCGCTGCGCGACTTCTACATTCGGTCGCAGCATGT
GCTCGATACGTTGCTGGCGGAGAAGGGCATCTCCTGGGCGCGCATGAAGCTGATCTATTTCATCCGGCACGAGGGCAGCG
TACGTTCGGTCGACCTGATGCGGGCCTTCGGCCATGCGCCGAGAACCGTCACCGAGGCGGTGGATGCGCTGGAGCGCGAT
GGCCTGGTCGAGCGCGTGCCCGATCCGGTCGACCGCCGCGCGAAGAACATCTCGCTCACGCGCGCCGGCGAAGCGCTGTA
CCAGTCGGCCGAACCGATCCGACGGCGGCTGGGCGCCGAAATCTGCGGCGTGCTGGATCCGGCCGAGCAGCGGGTGCTGC
AGGACATGCTGACGCGCATGAGCCAGCGTCTGGCGATGATCGAAGCGGCCGCGGAACGGGGCGCGCAGGGCTGA

Upstream 100 bases:

>100_bases
GGTGCTGCTCCATGGCCTCGGTCATGCTGACGATCCTCTTCGTGCGCGAACCCGGGTTCGCCTATATAATTTCACTACCA
TATCATATTGGGATGAATGT

Downstream 100 bases:

>100_bases
ACCGGCGCGCCCGGAGGTGGCGGAGCGCGCCGCCCCTGTCCGGTGCGGCCGTCACCTGTGGCGCTGCGGGCGCATCAAGC
GGACGCGGCGTCCGGCGGCT

Product: transcription regulator protein

Products: NA

Alternate protein names: MarR-Family Transcriptional Regulator; Transcription Regulator Protein; Transcription Regulator Protein MarR Family

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSAVIDDPVYAGLTGALRDFYIRSQHVLDTLLAEKGISWARMKLIYFIRHEGSVRSVDLMRAFGHAPRTVTEAVDALERD
GLVERVPDPVDRRAKNISLTRAGEALYQSAEPIRRRLGAEICGVLDPAEQRVLQDMLTRMSQRLAMIEAAAERGAQG

Sequences:

>Translated_157_residues
MSAVIDDPVYAGLTGALRDFYIRSQHVLDTLLAEKGISWARMKLIYFIRHEGSVRSVDLMRAFGHAPRTVTEAVDALERD
GLVERVPDPVDRRAKNISLTRAGEALYQSAEPIRRRLGAEICGVLDPAEQRVLQDMLTRMSQRLAMIEAAAERGAQG
>Mature_156_residues
SAVIDDPVYAGLTGALRDFYIRSQHVLDTLLAEKGISWARMKLIYFIRHEGSVRSVDLMRAFGHAPRTVTEAVDALERDG
LVERVPDPVDRRAKNISLTRAGEALYQSAEPIRRRLGAEICGVLDPAEQRVLQDMLTRMSQRLAMIEAAAERGAQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17475; Mature: 17344

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVIDDPVYAGLTGALRDFYIRSQHVLDTLLAEKGISWARMKLIYFIRHEGSVRSVDLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
RAFGHAPRTVTEAVDALERDGLVERVPDPVDRRAKNISLTRAGEALYQSAEPIRRRLGAE
HHHCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ICGVLDPAEQRVLQDMLTRMSQRLAMIEAAAERGAQG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAVIDDPVYAGLTGALRDFYIRSQHVLDTLLAEKGISWARMKLIYFIRHEGSVRSVDLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH
RAFGHAPRTVTEAVDALERDGLVERVPDPVDRRAKNISLTRAGEALYQSAEPIRRRLGAE
HHHCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ICGVLDPAEQRVLQDMLTRMSQRLAMIEAAAERGAQG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA