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The map label for this gene is nudJ [H]

Identifier: 17547443

GI number: 17547443

Start: 2930792

End: 2931298

Strand: Reverse

Name: nudJ [H]

Synonym: RSc2724

Alternate gene names: 17547443

Gene position: 2931298-2930792 (Counterclockwise)

Preceding gene: 17547444

Following gene: 17547442

Centisome position: 78.87

GC content: 70.81

Gene sequence:

>507_bases
ATGACCCAAGCTGTCCGTTGGAAACCCAGCGTCACCGTCGCCGCCGTGATCGAGCACGAGGGCCGCTTCCTGCTGGTCGA
GGAGCACACCGCTGCCGGCCTGCGCCTGAACCAGCCCGCCGGTCACCTCGATCCGGACGAGAGCCTGGTCGACGCCGTCG
CGCGCGAGGCGCTGGAAGAGACCGCGCACAGCTTCGCGCCGACCGCGTTCCTCGGCTGCTACATGGCGCAGTTCCAGCCG
CCCGTGGGCGATCCGGTCACCTATGTGCGGATGGCCTTCACCGGCGAGCTCGGGCCCTTCGACCCGCGCCGCACGCTGGA
CGACGGCATCGTCCGCACGGTCTGGATGACCGCCGACGAGATCCGCGCCTGCCCCGAGCGCCACCGCAGCCCGCTGCTGC
TGGCCTGCGTGGAGGACTACCTGGCCGGCAAGCGCTATCCGCTGGAGGTCATCCACACGCACCCGAGCGTCTACGGCCTC
ACCTCGGGCCACGAGGCGGCGCAATGA

Upstream 100 bases:

>100_bases
CCCTGTCCGGTGCGGCCGTCACCTGTGGCGCTGCGGGCGCATCAAGCGGACGCGGCGTCCGGCGGCTACAATAACGCCTT
GTTTTTGTTGCCTTTTTGCC

Downstream 100 bases:

>100_bases
GCGGCAAGCGCGTGGTCGTCGGCATGTCCGGCGGGGTGGATTCCTCCGTCACGGCGTGGCTGCTCAAGCAGCAGGGCTAC
GAGGTCATCGGCCTGTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTQAVRWKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEETAHSFAPTAFLGCYMAQFQP
PVGDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADEIRACPERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGL
TSGHEAAQ

Sequences:

>Translated_168_residues
MTQAVRWKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEETAHSFAPTAFLGCYMAQFQP
PVGDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADEIRACPERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGL
TSGHEAAQ
>Mature_167_residues
TQAVRWKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEETAHSFAPTAFLGCYMAQFQPP
VGDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADEIRACPERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGLT
SGHEAAQ

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=144, Percent_Identity=43.0555555555556, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 18547; Mature: 18416

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQAVRWKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEE
CCCCEECCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
TAHSFAPTAFLGCYMAQFQPPVGDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADE
HHHHCCHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHH
IRACPERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGLTSGHEAAQ
HHHCHHHCCCCEEHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure 
TQAVRWKPSVTVAAVIEHEGRFLLVEEHTAAGLRLNQPAGHLDPDESLVDAVAREALEE
CCCEECCCCEEEEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
TAHSFAPTAFLGCYMAQFQPPVGDPVTYVRMAFTGELGPFDPRRTLDDGIVRTVWMTADE
HHHHCCHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHH
IRACPERHRSPLLLACVEDYLAGKRYPLEVIHTHPSVYGLTSGHEAAQ
HHHCHHHCCCCEEHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA