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The map label for this gene is 17547398

Identifier: 17547398

GI number: 17547398

Start: 2888589

End: 2889062

Strand: Reverse

Name: 17547398

Synonym: RSc2679

Alternate gene names: NA

Gene position: 2889062-2888589 (Counterclockwise)

Preceding gene: 17547399

Following gene: 17547397

Centisome position: 77.74

GC content: 66.88

Gene sequence:

>474_bases
ATGCCACCGCGTTCGGGAAAGCCGTCCTGCCGGGGTGTCACGCTGCCGGAACTGCTGGTCGGGCTTGCCGTGCTGTCGAT
TCTCATCGTCATCGCCGTCCCGTCGTTCTCCGGCCTGATCGCCACGCAGCGCGCACGCAATGCTTCGCTCGACCTGTCCG
CCGCGATCACGCTGGCGCGCAGCGAGGCCGTCAAGCAGAACACCACGGCCACGGTCTCCTCGACCGGCAATTGGGCGACC
GGCTGGGCGCTGGCGGTGAACTCCACCGTCATCCGCACCTTTGGTCCCTACACCGGCGTCACGATTGCGCCCAGCAACGG
CAATACCTTGTCGATCGGCAATGATGGCCGGCCGACGGCGGGCGCCGTCACGTTTCTTGTCACGCCGACGACGTCGGCAC
AGACGTCTTCGACGATCTGCGTCCAGGTGGGCGGCACCGGTCGGGTCGCCCTGGTAACGGGAGGTTGCTCATGA

Upstream 100 bases:

>100_bases
CGACGCCGCGTGCGGCACGCTCGGCCTGTCGAACACCGGCAGCAAGACGGCCTCCGGCGGTGCCTCCAACTGCTGGAAAT
AGCCCATGCACAGGACATTC

Downstream 100 bases:

>100_bases
GCGCACGCATGCGTCGACGGAGCTCGCGGCAGCGCAAGGCAGGCCAGCGCGGGCTGACCCTGATCGAGGTGCTGATCTCG
GTGGTGATCCTGCTGGCGGC

Product: type 4 fimbrial pilin related transmembrane protein

Products: NA

Alternate protein names: Type 4 Fimbrial Pilin Related Transmembrane Protein; Type IV Pilus Transmembrane Protein FimT

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPPRSGKPSCRGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLARSEAVKQNTTATVSSTGNWAT
GWALAVNSTVIRTFGPYTGVTIAPSNGNTLSIGNDGRPTAGAVTFLVTPTTSAQTSSTICVQVGGTGRVALVTGGCS

Sequences:

>Translated_157_residues
MPPRSGKPSCRGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLARSEAVKQNTTATVSSTGNWAT
GWALAVNSTVIRTFGPYTGVTIAPSNGNTLSIGNDGRPTAGAVTFLVTPTTSAQTSSTICVQVGGTGRVALVTGGCS
>Mature_156_residues
PPRSGKPSCRGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLARSEAVKQNTTATVSSTGNWATG
WALAVNSTVIRTFGPYTGVTIAPSNGNTLSIGNDGRPTAGAVTFLVTPTTSAQTSSTICVQVGGTGRVALVTGGCS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15758; Mature: 15627

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRSGKPSCRGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLAR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHEEEEHH
SEAVKQNTTATVSSTGNWATGWALAVNSTVIRTFGPYTGVTIAPSNGNTLSIGNDGRPTA
HHHHHCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCEEEECCCCCEEEECCCCCCCC
GAVTFLVTPTTSAQTSSTICVQVGGTGRVALVTGGCS
CEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCC
>Mature Secondary Structure 
PPRSGKPSCRGVTLPELLVGLAVLSILIVIAVPSFSGLIATQRARNASLDLSAAITLAR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHEEEEHH
SEAVKQNTTATVSSTGNWATGWALAVNSTVIRTFGPYTGVTIAPSNGNTLSIGNDGRPTA
HHHHHCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCEEEECCCCCEEEECCCCCCCC
GAVTFLVTPTTSAQTSSTICVQVGGTGRVALVTGGCS
CEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA