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The map label for this gene is hslR [H]

Identifier: 17547361

GI number: 17547361

Start: 2842564

End: 2842959

Strand: Reverse

Name: hslR [H]

Synonym: RSc2642

Alternate gene names: 17547361

Gene position: 2842959-2842564 (Counterclockwise)

Preceding gene: 17547362

Following gene: 17547358

Centisome position: 76.5

GC content: 69.7

Gene sequence:

>396_bases
ATGAAGGTGAGCACCGACGCGGATGGCCGCGTGCGCATCGACAAATGGCTGTGGGCGGCGCGCTTCTTCAAGACACGCTC
GCAGGCGACCGATGCGGTGGAGCGTGGCCGCGTGCAGATCAACGACCAGCCGGTGCGTCCGGCCAAGGACGTGAAGATCG
GCGACCGCGTGCGCGTGGCCGCGCATGAACAGCAGTGGGAGGTGAATGTGCTGGCGCTGGCGGAAGTCCGCGGGCCCGCC
TCGGTGGCGCAGACCCTCTACGCCGAGACGCAGGCGAGCCGCTTAAAACGTGTCGGGGCGGCGCAGCAGCGGCACCTGTA
CCGGGAACCCGCCACGCAGATCGCCGGCCGGCCGACCAAGCGCGACCGGCGCCGCATCGATAAGCTGGGCGGATGA

Upstream 100 bases:

>100_bases
ATATCGCGCAGGCGCACCTGCAGGGCTGGCCGCTCGCGCTGCCGCATCCGCATGTGCTGGAAGCCAGCCGCACGCGCGCG
CAGAGCAAGGGGGCCGCGGC

Downstream 100 bases:

>100_bases
CGGCAAGTGTGTGCTAACTTGTTACGCCCAGTGCGCGCGGGGTCTGCAGCATGCGGGGTTGCATGAAGTAGTGCTTGAAG
ATCGCTTTCCCGCTGCCATA

Product: heat shock protein 15

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKVSTDADGRVRIDKWLWAARFFKTRSQATDAVERGRVQINDQPVRPAKDVKIGDRVRVAAHEQQWEVNVLALAEVRGPA
SVAQTLYAETQASRLKRVGAAQQRHLYREPATQIAGRPTKRDRRRIDKLGG

Sequences:

>Translated_131_residues
MKVSTDADGRVRIDKWLWAARFFKTRSQATDAVERGRVQINDQPVRPAKDVKIGDRVRVAAHEQQWEVNVLALAEVRGPA
SVAQTLYAETQASRLKRVGAAQQRHLYREPATQIAGRPTKRDRRRIDKLGG
>Mature_131_residues
MKVSTDADGRVRIDKWLWAARFFKTRSQATDAVERGRVQINDQPVRPAKDVKIGDRVRVAAHEQQWEVNVLALAEVRGPA
SVAQTLYAETQASRLKRVGAAQQRHLYREPATQIAGRPTKRDRRRIDKLGG

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=114, Percent_Identity=41.2280701754386, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 14840; Mature: 14840

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSTDADGRVRIDKWLWAARFFKTRSQATDAVERGRVQINDQPVRPAKDVKIGDRVRVA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEE
AHEQQWEVNVLALAEVRGPASVAQTLYAETQASRLKRVGAAQQRHLYREPATQIAGRPTK
ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCH
RDRRRIDKLGG
HHHHHHHHCCC
>Mature Secondary Structure
MKVSTDADGRVRIDKWLWAARFFKTRSQATDAVERGRVQINDQPVRPAKDVKIGDRVRVA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEE
AHEQQWEVNVLALAEVRGPASVAQTLYAETQASRLKRVGAAQQRHLYREPATQIAGRPTK
ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCH
RDRRRIDKLGG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]