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The map label for this gene is trbL

Identifier: 17547297

GI number: 17547297

Start: 2784928

End: 2786301

Strand: Reverse

Name: trbL

Synonym: RSc2578

Alternate gene names: NA

Gene position: 2786301-2784928 (Counterclockwise)

Preceding gene: 17547298

Following gene: 17547296

Centisome position: 74.97

GC content: 67.83

Gene sequence:

>1374_bases
ATGAATGACGTGACCATCATCGACAGATTCCTCGATACGTTCTCGCGCTATATCGACTCCGGTTTCGGGCTATTGCAAGG
CGAAGTCGCGTTCCTGACGGCCACGCTTATCGCCATCGACATGACCATCGCCGGCCTGTATTGGGCCATGAGCCATGCGA
CCGGCCAGAGCGAAGACGTGATCGCCAAGCTGCTGCGCAAGGTGCTCTACGTCGGTGCCTTCGCCTACATCATCGGCAAC
TTCAACTGGCTCTCGGGCATCGTGTTCCGGTCGTTTGCTGGGCTAGGTATCACCGCCACCGGCTCCGCTATCACGATGGA
GAACTTCTTGCAGCCGGGCCGCCTGGCGAAGACCGGCATCGACGCGGCCGCGCCGATCCTCGACCAGATCGGCGACATGG
CCGGCTTCCCCGAAGTGTTCGTGAACCTTGACCCCATCGTGGTGCTGTTCATCGCCTGGCTGGTGGTGATCCTCTGCTTC
TTCGTGCTCGCGGTACAGCTTTTCATCACGCTGATCGAGTTCAAGCTGACCACGCTTGCCGGGTTCGTCCTGATCCCGTT
TGCGCTCTGGAACAAGACCTCGTTCCTCGCGGAAAAGGTGCTCGGCAACGTGGTTTCGTCGGGCATCAAGGTCTTGGTGC
TGGCCGTCATCGTCGGCATCGGCTCGGGCCTGTTCGCGGAGTTCCAGGTTCATCCCGACGAGCCTTCCATCGACCACGCG
CTGGTCGTGATGCTGGCCTCGCTCGCGCTGCTGGCGCTGGGCATCTTCGGCCCCGGCATCGCCACGGGCCTCGTGTCCGG
TGCGCCGCAGCTCGGCGCGGGCGCGATGGCCGGCGCTGCTGTCGGTGCTGTCGGCACGGGAGTTGCCATCGGTGCCGCCG
CGACTGGCGTAGGCGGTGCCGTTATGGCGGGCGCGCGCATGGCCCCGGCCGCCGCCAAGCTGGCCGGCAGCGGCGCACGC
GCCGCGACGTCGGCGGCCAGCAGCGCCAAGTCCGCATTCCAGGCCGGTTCCGCCGCTGCGGGCGGCGGGGCCAAGGGCGC
GGCCGCTGGCCTCGGCAACGTCGCCAAGACCGGTGCGCAGGCCGCAGGCCGCCGCGCCGCATCGCGTGTGTCCGCTGCCG
GGCAGAAGATGGCCGGTTCCTTCCGTGCTGGCTGGAACGGCGCGGATGCCGGCGCTGCCGGTTCCGACCAGGCGGCCGCA
GGCGAAAGCGCGGACAGCGCCGCCAGCGCACCAAAGCAGGAGCAACCCGCCTGGGCCAAGCAGATGCACCGCCGCCAACA
GATCACCCACGCCGCGACCACCGCTGCCCACACGCTGCGCGGTGGCGATGGTGGCGGCTCGGGGCAAGGCCCGAGCCTGC
GCCCCGATGAGTGA

Upstream 100 bases:

>100_bases
GGACGCTGGCCGACCTGCCGCCGATTCCGCCCAGCTTCGACACACCCGCCGACGACGCGCCGGAAGGCGATGCGCCGCTA
GCCGCTGCGGAGGACACGCC

Downstream 100 bases:

>100_bases
CCCGATACCTGACCACCAAGGAGAACCCTTATGCGATTCAAACGCCCGCAGGTGCGCTATGCCGATACGCCGCAACCCGC
CACTCCGTACCAATCCGCCG

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Plasmid Conjugal Transfer Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIAIDMTIAGLYWAMSHATGQSEDVIAKLLRKVLYVGAFAYIIGN
FNWLSGIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAAAPILDQIGDMAGFPEVFVNLDPIVVLFIAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLIPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQVHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGGAVMAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAAAGLGNVAKTGAQAAGRRAASRVSAAGQKMAGSFRAGWNGADAGAAGSDQAAA
GESADSAASAPKQEQPAWAKQMHRRQQITHAATTAAHTLRGGDGGGSGQGPSLRPDE

Sequences:

>Translated_457_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIAIDMTIAGLYWAMSHATGQSEDVIAKLLRKVLYVGAFAYIIGN
FNWLSGIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAAAPILDQIGDMAGFPEVFVNLDPIVVLFIAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLIPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQVHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGGAVMAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAAAGLGNVAKTGAQAAGRRAASRVSAAGQKMAGSFRAGWNGADAGAAGSDQAAA
GESADSAASAPKQEQPAWAKQMHRRQQITHAATTAAHTLRGGDGGGSGQGPSLRPDE
>Mature_457_residues
MNDVTIIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIAIDMTIAGLYWAMSHATGQSEDVIAKLLRKVLYVGAFAYIIGN
FNWLSGIVFRSFAGLGITATGSAITMENFLQPGRLAKTGIDAAAPILDQIGDMAGFPEVFVNLDPIVVLFIAWLVVILCF
FVLAVQLFITLIEFKLTTLAGFVLIPFALWNKTSFLAEKVLGNVVSSGIKVLVLAVIVGIGSGLFAEFQVHPDEPSIDHA
LVVMLASLALLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAVGTGVAIGAAATGVGGAVMAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAAAGLGNVAKTGAQAAGRRAASRVSAAGQKMAGSFRAGWNGADAGAAGSDQAAA
GESADSAASAPKQEQPAWAKQMHRRQQITHAATTAAHTLRGGDGGGSGQGPSLRPDE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45859; Mature: 45859

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA