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The map label for this gene is 17547279

Identifier: 17547279

GI number: 17547279

Start: 2768636

End: 2769265

Strand: Direct

Name: 17547279

Synonym: RSc2560

Alternate gene names: NA

Gene position: 2768636-2769265 (Clockwise)

Preceding gene: 17547277

Following gene: 17547280

Centisome position: 74.5

GC content: 66.83

Gene sequence:

>630_bases
ATGGTGGATAACACAACCCGATCGGAACGCTCCCGCAAGGCCGCCATCCAGGCGGCGCTGGCCATTCTTTCGCGCGATGG
TCCGGGCCAATTGACGTTCGATGCCATCGCGCGGGAGAGCGGCATCAGCAAGGGCGGACTGATGCACCAGTTCCCCAACA
AGGGCGCGGTGCTCAAGGCGCTGCTCGAGCACCAGATCGAGCACTTCGACAAATTCACCCGAGGCTATCTGGCCGAGATC
GGCGAAGACCGGCCGCAGGCCCACCTTGCCGCACAGATCGCAACGCTGCGCGAGAGCATCACGACCCCCCACTCCGTCGC
GTTCGCCATCCTCGCCGCGCTGATCGAAGACCCGGAACTGCTCGCCCTCAACCGGCAGATGGAAGCCGATGCGATCGAAC
GCATCCGGGCCGAGGCGACCGATCCGGACCTGTCGCTCCTGCGCATGGAGGCCGCCAAGGGACTCGCGCTGAGCGCGCTG
TTCGGACTGAGCGCCCTGTCCGTACAGGAACGCGATCGCCTGTTCGAGCGATTGCTGGACGACCACCAATGGCCGGATGC
TCCGGATGCCAAGAAGCCGCGCGCCGCGCGGCCCGCACGCAAGCCGGCCCGCAGCGGCCAGAGCCACTGA

Upstream 100 bases:

>100_bases
TAGAATGGCGGTCCAGTCACCCTTTGCATGAACCGACCCGCCGCTCCGGGCGGGCGATCGCGCGGCCGCGCCGGCAGCCG
CGCCAGCCCTGAACACATCC

Downstream 100 bases:

>100_bases
AACCGTGACGCAAACCGGCGTGCGGCGAACACAGCACGCCGGCTTGCCCGCCCTCCTCCCCTGACGACACCCCTCGGCAG
ATGGCCGGTGGTCGTGCCGC

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Protein Tetr-Like; Transcription Regulator Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MVDNTTRSERSRKAAIQAALAILSRDGPGQLTFDAIARESGISKGGLMHQFPNKGAVLKALLEHQIEHFDKFTRGYLAEI
GEDRPQAHLAAQIATLRESITTPHSVAFAILAALIEDPELLALNRQMEADAIERIRAEATDPDLSLLRMEAAKGLALSAL
FGLSALSVQERDRLFERLLDDHQWPDAPDAKKPRAARPARKPARSGQSH

Sequences:

>Translated_209_residues
MVDNTTRSERSRKAAIQAALAILSRDGPGQLTFDAIARESGISKGGLMHQFPNKGAVLKALLEHQIEHFDKFTRGYLAEI
GEDRPQAHLAAQIATLRESITTPHSVAFAILAALIEDPELLALNRQMEADAIERIRAEATDPDLSLLRMEAAKGLALSAL
FGLSALSVQERDRLFERLLDDHQWPDAPDAKKPRAARPARKPARSGQSH
>Mature_209_residues
MVDNTTRSERSRKAAIQAALAILSRDGPGQLTFDAIARESGISKGGLMHQFPNKGAVLKALLEHQIEHFDKFTRGYLAEI
GEDRPQAHLAAQIATLRESITTPHSVAFAILAALIEDPELLALNRQMEADAIERIRAEATDPDLSLLRMEAAKGLALSAL
FGLSALSVQERDRLFERLLDDHQWPDAPDAKKPRAARPARKPARSGQSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22925; Mature: 22925

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNTTRSERSRKAAIQAALAILSRDGPGQLTFDAIARESGISKGGLMHQFPNKGAVLKA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LLEHQIEHFDKFTRGYLAEIGEDRPQAHLAAQIATLRESITTPHSVAFAILAALIEDPEL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
LALNRQMEADAIERIRAEATDPDLSLLRMEAAKGLALSALFGLSALSVQERDRLFERLLD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DHQWPDAPDAKKPRAARPARKPARSGQSH
HCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVDNTTRSERSRKAAIQAALAILSRDGPGQLTFDAIARESGISKGGLMHQFPNKGAVLKA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LLEHQIEHFDKFTRGYLAEIGEDRPQAHLAAQIATLRESITTPHSVAFAILAALIEDPEL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
LALNRQMEADAIERIRAEATDPDLSLLRMEAAKGLALSALFGLSALSVQERDRLFERLLD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DHQWPDAPDAKKPRAARPARKPARSGQSH
HCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA