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The map label for this gene is ychA [C]

Identifier: 17547277

GI number: 17547277

Start: 2766915

End: 2767760

Strand: Direct

Name: ychA [C]

Synonym: RSc2558

Alternate gene names: 17547277

Gene position: 2766915-2767760 (Clockwise)

Preceding gene: 17547276

Following gene: 17547279

Centisome position: 74.45

GC content: 64.18

Gene sequence:

>846_bases
ATGGCAACCAAAGTCCTCGATTATTTTTCGGCCCTGGTCGCGGACGACGACAGCATCCCCCTGACAGAAACCGCCCTGTC
GATCGCGCAGGACGCCTACCCGGACCTGGACCTGCAGGCCGAGCTGGCCGCCATCGACATGCTCGTCGCACGGCTGAAGA
GCCGCATCGTCGAAGGCACGCCGGCCATCCAGCGCCTGCGGGTGCTCAACCAGTTCTTCTATCGCGAGTTGGGCTTCGGG
CCCAATGCAAACGATTACTACGACCCCGAGAACTCCTATCTGAATGCCGTGCTGCAGACACGGCGCGGCATCCCGATCTC
ACTGGCGGTGCTGCTGATGGAGATCGGGCAGCAGATCGGGCTACCGCTCAAGGGCGTGTCCTTCCCGAACCACTTCCTGG
TGCGCATGAGCATTCCCGCAGGCGAGGTCGTGATCGATCCGCTGACCGGGCAAACGCTGTCGAAGGAAGAACTGCAGGAG
ATGCTCGACCCGTACCTGGAAAAGGAAGGCATCGAAGACCCGAACTCGGTACCGCTCGGGGTGTTCCTGCAGGTGGCGAC
GCACCGCGAGATCGTCGCGCGCATGCTGCGCAACCTGAAGGCGATCTATCTGCAGGAATCGCGCTGGCAGCGGCTGCTGG
CGGTGCAGCAGCGGCTGGTGATCCTGCTGCCGGAGTCGATCGAAGAAGTGCGCGACCGGGGGCTGGCCTACGCCAACCTG
GAATGCTTCCGGCCGGCCCTGGCCGACCTGGAAGCCTATGTGGATGCCCGCCCCGATGCGGCCGACACCCCCAAGCTCAA
GGAGCGCATGCCGACGCTGCGCGCCATGAGCCGCAACCTCAACTGA

Upstream 100 bases:

>100_bases
CGCTGCTGGGGGCCTGCCTGATCCTGTGCGCGGTGGTGTATTTCGGTACACTGTGGCTCACCGGCTTGAAGTTCTCCACC
TTCAGGAAAAGGGCGATCTG

Downstream 100 bases:

>100_bases
GGCTTATTTCTGCACCACCGTGCGGCGGCGCTTGAGCAGCTTCCACAGCCCGCCCAGCACCAGCGGCACGACGGCCGCGC
CCAGGCCGATCAGCACGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MATKVLDYFSALVADDDSIPLTETALSIAQDAYPDLDLQAELAAIDMLVARLKSRIVEGTPAIQRLRVLNQFFYRELGFG
PNANDYYDPENSYLNAVLQTRRGIPISLAVLLMEIGQQIGLPLKGVSFPNHFLVRMSIPAGEVVIDPLTGQTLSKEELQE
MLDPYLEKEGIEDPNSVPLGVFLQVATHREIVARMLRNLKAIYLQESRWQRLLAVQQRLVILLPESIEEVRDRGLAYANL
ECFRPALADLEAYVDARPDAADTPKLKERMPTLRAMSRNLN

Sequences:

>Translated_281_residues
MATKVLDYFSALVADDDSIPLTETALSIAQDAYPDLDLQAELAAIDMLVARLKSRIVEGTPAIQRLRVLNQFFYRELGFG
PNANDYYDPENSYLNAVLQTRRGIPISLAVLLMEIGQQIGLPLKGVSFPNHFLVRMSIPAGEVVIDPLTGQTLSKEELQE
MLDPYLEKEGIEDPNSVPLGVFLQVATHREIVARMLRNLKAIYLQESRWQRLLAVQQRLVILLPESIEEVRDRGLAYANL
ECFRPALADLEAYVDARPDAADTPKLKERMPTLRAMSRNLN
>Mature_280_residues
ATKVLDYFSALVADDDSIPLTETALSIAQDAYPDLDLQAELAAIDMLVARLKSRIVEGTPAIQRLRVLNQFFYRELGFGP
NANDYYDPENSYLNAVLQTRRGIPISLAVLLMEIGQQIGLPLKGVSFPNHFLVRMSIPAGEVVIDPLTGQTLSKEELQEM
LDPYLEKEGIEDPNSVPLGVFLQVATHREIVARMLRNLKAIYLQESRWQRLLAVQQRLVILLPESIEEVRDRGLAYANLE
CFRPALADLEAYVDARPDAADTPKLKERMPTLRAMSRNLN

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=166, Percent_Identity=32.5301204819277, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI16306500, Length=166, Percent_Identity=32.5301204819277, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI1787465, Length=228, Percent_Identity=32.0175438596491, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31591; Mature: 31460

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKVLDYFSALVADDDSIPLTETALSIAQDAYPDLDLQAELAAIDMLVARLKSRIVEGT
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAIQRLRVLNQFFYRELGFGPNANDYYDPENSYLNAVLQTRRGIPISLAVLLMEIGQQIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
LPLKGVSFPNHFLVRMSIPAGEVVIDPLTGQTLSKEELQEMLDPYLEKEGIEDPNSVPLG
CCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
VFLQVATHREIVARMLRNLKAIYLQESRWQRLLAVQQRLVILLPESIEEVRDRGLAYANL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCEEECH
ECFRPALADLEAYVDARPDAADTPKLKERMPTLRAMSRNLN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATKVLDYFSALVADDDSIPLTETALSIAQDAYPDLDLQAELAAIDMLVARLKSRIVEGT
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAIQRLRVLNQFFYRELGFGPNANDYYDPENSYLNAVLQTRRGIPISLAVLLMEIGQQIG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
LPLKGVSFPNHFLVRMSIPAGEVVIDPLTGQTLSKEELQEMLDPYLEKEGIEDPNSVPLG
CCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
VFLQVATHREIVARMLRNLKAIYLQESRWQRLLAVQQRLVILLPESIEEVRDRGLAYANL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCEEECH
ECFRPALADLEAYVDARPDAADTPKLKERMPTLRAMSRNLN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]