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The map label for this gene is ydjR [C]

Identifier: 17547241

GI number: 17547241

Start: 2728633

End: 2729235

Strand: Reverse

Name: ydjR [C]

Synonym: RSc2522

Alternate gene names: 17547241

Gene position: 2729235-2728633 (Counterclockwise)

Preceding gene: 17547245

Following gene: 17547239

Centisome position: 73.44

GC content: 73.13

Gene sequence:

>603_bases
TTGTCCGCGATGAAACTGCTGCTGCCCGAGACGATGCGCCGGATGCCGTGGAAGAACGGCGGCGGCATCACGACCGAAAT
CGCCATCGCCCCGCCGGGCGCGACGCTGGACGCGTTCGACTGGCGGATCAGCACCGCACGGGTGGAAGCGGCCGGACCGT
TTTCGCGTTTCGCCGGCATCGACCGCTCGCTGTCGGTGATCGCCGGCGGCTGCCTGACGCTGCATCGCGCCGACGGCGAA
ACCGTGACGCTTGCGCCGGGCGGGGCGCCGGTGCGCTTTGCCGGCGAAACGGCGATCCACGCCACACTCGATGCGCCGCT
GTCCGACTTCAACGTGATGACGCGACGCGGCGCCTGGGCGCATCGGGCCGAGACGCTGGCGATGGCGGCGGGCGAGCGCC
GCGTGCTGTCGCCGGTGCGGCCGGGCATGCAGTGGATGGTCTATTGCGCGCGGGGCGGGCTGTCCGTGGGCGGGCCCGAT
GCGTGTGCGATGCCGGTGCCGCAGGGTGCCGCCCTCTGGCTGGATGCGCGGGGCGGCGGCGAGGCGCTGATCGCGCAGGC
CGATGCGGCCGGCTACCTGGTGGCGCTCTGGCCGGTGGCGTAG

Upstream 100 bases:

>100_bases
CGGCCCGCATGCTGTCCCGGGCTGTCAGGGGCGGGGCCTGCCGTGCGAGGTTGCTCGCGCGCGCAAAGTCGCGCATGCTG
CGCGCCATTCCTTCGATGTG

Downstream 100 bases:

>100_bases
CGCAGCGCGCCGCCCAAAAGAAAAGGGACCCGGCTGGGTCCCTTCGAGGTCTTCCGGCCCCGTGGGGCGCGGCAGAAGAC
GCTTACTTCTTCTTGTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSAMKLLLPETMRRMPWKNGGGITTEIAIAPPGATLDAFDWRISTARVEAAGPFSRFAGIDRSLSVIAGGCLTLHRADGE
TVTLAPGGAPVRFAGETAIHATLDAPLSDFNVMTRRGAWAHRAETLAMAAGERRVLSPVRPGMQWMVYCARGGLSVGGPD
ACAMPVPQGAALWLDARGGGEALIAQADAAGYLVALWPVA

Sequences:

>Translated_200_residues
MSAMKLLLPETMRRMPWKNGGGITTEIAIAPPGATLDAFDWRISTARVEAAGPFSRFAGIDRSLSVIAGGCLTLHRADGE
TVTLAPGGAPVRFAGETAIHATLDAPLSDFNVMTRRGAWAHRAETLAMAAGERRVLSPVRPGMQWMVYCARGGLSVGGPD
ACAMPVPQGAALWLDARGGGEALIAQADAAGYLVALWPVA
>Mature_199_residues
SAMKLLLPETMRRMPWKNGGGITTEIAIAPPGATLDAFDWRISTARVEAAGPFSRFAGIDRSLSVIAGGCLTLHRADGET
VTLAPGGAPVRFAGETAIHATLDAPLSDFNVMTRRGAWAHRAETLAMAAGERRVLSPVRPGMQWMVYCARGGLSVGGPDA
CAMPVPQGAALWLDARGGGEALIAQADAAGYLVALWPVA

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=109, Percent_Identity=40.3669724770642, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20865; Mature: 20734

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMKLLLPETMRRMPWKNGGGITTEIAIAPPGATLDAFDWRISTARVEAAGPFSRFAGI
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHCC
DRSLSVIAGGCLTLHRADGETVTLAPGGAPVRFAGETAIHATLDAPLSDFNVMTRRGAWA
CCCHHEEECCEEEEEECCCCEEEECCCCCCEEECCCEEEEEEECCCCCCCHHHHCCCCCH
HRAETLAMAAGERRVLSPVRPGMQWMVYCARGGLSVGGPDACAMPVPQGAALWLDARGGG
HHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCC
EALIAQADAAGYLVALWPVA
CEEEEECCCCCEEEEEEECC
>Mature Secondary Structure 
SAMKLLLPETMRRMPWKNGGGITTEIAIAPPGATLDAFDWRISTARVEAAGPFSRFAGI
CCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEEECCCCHHHHHCC
DRSLSVIAGGCLTLHRADGETVTLAPGGAPVRFAGETAIHATLDAPLSDFNVMTRRGAWA
CCCHHEEECCEEEEEECCCCEEEECCCCCCEEECCCEEEEEEECCCCCCCHHHHCCCCCH
HRAETLAMAAGERRVLSPVRPGMQWMVYCARGGLSVGGPDACAMPVPQGAALWLDARGGG
HHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCC
EALIAQADAAGYLVALWPVA
CEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]