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The map label for this gene is yraR [H]

Identifier: 17547239

GI number: 17547239

Start: 2727211

End: 2727963

Strand: Reverse

Name: yraR [H]

Synonym: RSc2520

Alternate gene names: 17547239

Gene position: 2727963-2727211 (Counterclockwise)

Preceding gene: 17547241

Following gene: 17547238

Centisome position: 73.4

GC content: 73.57

Gene sequence:

>753_bases
ATGACGGATCGGCAAACGCTTGTTGCACAAGGCTTCACGGCCGATGCCAGCGGGGCGGAGCAGCCGCGCGGGCCCTCGGT
CCTGGTGGTCGGCGCGAGCGGGCTGGTGGGGCGTGCCGTGGTGCGCCGGCTGGTCGCGCAGACCTGGGCCGGCCGCGTGA
CGGCACTCGTACGGCGGCCCGGAGCCTTGACAGCAGGCCAGGCGCTGCCCGGCAGGCTGCGCGAATGCGTGGTGGATTTC
GCGCGGCTCGATGCGCCCGAGACGCAGTCTGTGCTGGCCGCCGACATCGTCATCTGCGCGCTGGGGACCACCCTGCGCGA
CGCCGGTTCGCAGGCAGCGTTCCGGCGGGTGGACGTGGACTATCCGGCCGAGATCGCGCGGCGCGCGTTCGCCGCCGGTG
CGCACCATTTCCTGCTGGTCAGCGCGCTGGGCGCCGATGCGCGGTCGAGCGTGTTCTACAACCGCTGCAAGGGCGAGGCC
GAGGCGGCGATCCTGTCGGTGGGTTTTCCGTCGGTGACGGTGGTGCGGCCGTCTCTGCTGCTCGGCGAGCGTGCGGCATT
CCGCCTCCGGGAGCGCGTGGCGCAGACGCTGTCGAAAGCGGTCGGCGGCCTGGTGCCGCAGGCGTGGCGGCCGGTCCCGG
TGGAGTCGGTGGCCGCCGCGCTGGTGACGGCGGCGCGGGTGGATGCCCCGGGCGTGCGGGTCCTGGAAAATCCCGCACTG
CTGGCCGCGCAGGACGAGCGGCCGGTGGCATGA

Upstream 100 bases:

>100_bases
TCGCGCATCGGAAAACGCGCGGCACCGATGGACCCAGCATGGCGCTCTGCGCGCCGTACACTGCCTGCATGCATCGCTCA
CGGACTTCAGGGAGAACATC

Downstream 100 bases:

>100_bases
CCTGCCGCAGTGCCCGGCCTCCGCGCCTTACCCGATCGCCGTGCCGGCGCGATGACCCATCGGTGTGCGCGTGCTGACGA
TGCCAGCGGCCACCGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTDRQTLVAQGFTADASGAEQPRGPSVLVVGASGLVGRAVVRRLVAQTWAGRVTALVRRPGALTAGQALPGRLRECVVDF
ARLDAPETQSVLAADIVICALGTTLRDAGSQAAFRRVDVDYPAEIARRAFAAGAHHFLLVSALGADARSSVFYNRCKGEA
EAAILSVGFPSVTVVRPSLLLGERAAFRLRERVAQTLSKAVGGLVPQAWRPVPVESVAAALVTAARVDAPGVRVLENPAL
LAAQDERPVA

Sequences:

>Translated_250_residues
MTDRQTLVAQGFTADASGAEQPRGPSVLVVGASGLVGRAVVRRLVAQTWAGRVTALVRRPGALTAGQALPGRLRECVVDF
ARLDAPETQSVLAADIVICALGTTLRDAGSQAAFRRVDVDYPAEIARRAFAAGAHHFLLVSALGADARSSVFYNRCKGEA
EAAILSVGFPSVTVVRPSLLLGERAAFRLRERVAQTLSKAVGGLVPQAWRPVPVESVAAALVTAARVDAPGVRVLENPAL
LAAQDERPVA
>Mature_249_residues
TDRQTLVAQGFTADASGAEQPRGPSVLVVGASGLVGRAVVRRLVAQTWAGRVTALVRRPGALTAGQALPGRLRECVVDFA
RLDAPETQSVLAADIVICALGTTLRDAGSQAAFRRVDVDYPAEIARRAFAAGAHHFLLVSALGADARSSVFYNRCKGEAE
AAILSVGFPSVTVVRPSLLLGERAAFRLRERVAQTLSKAVGGLVPQAWRPVPVESVAAALVTAARVDAPGVRVLENPALL
AAQDERPVA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=222, Percent_Identity=34.2342342342342, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI148728168, Length=222, Percent_Identity=34.2342342342342, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI148728164, Length=222, Percent_Identity=34.2342342342342, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI148728166, Length=222, Percent_Identity=33.7837837837838, Blast_Score=107, Evalue=9e-24,
Organism=Escherichia coli, GI87082218, Length=220, Percent_Identity=35.4545454545455, Blast_Score=120, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71983631, Length=216, Percent_Identity=31.4814814814815, Blast_Score=107, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 26131; Mature: 26000

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRQTLVAQGFTADASGAEQPRGPSVLVVGASGLVGRAVVRRLVAQTWAGRVTALVRRP
CCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GALTAGQALPGRLRECVVDFARLDAPETQSVLAADIVICALGTTLRDAGSQAAFRRVDVD
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
YPAEIARRAFAAGAHHFLLVSALGADARSSVFYNRCKGEAEAAILSVGFPSVTVVRPSLL
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHEEEEECCCCCEEEECCHHH
LGERAAFRLRERVAQTLSKAVGGLVPQAWRPVPVESVAAALVTAARVDAPGVRVLENPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCE
LAAQDERPVA
EEECCCCCCC
>Mature Secondary Structure 
TDRQTLVAQGFTADASGAEQPRGPSVLVVGASGLVGRAVVRRLVAQTWAGRVTALVRRP
CCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GALTAGQALPGRLRECVVDFARLDAPETQSVLAADIVICALGTTLRDAGSQAAFRRVDVD
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
YPAEIARRAFAAGAHHFLLVSALGADARSSVFYNRCKGEAEAAILSVGFPSVTVVRPSLL
CHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHEEEEECCCCCEEEECCHHH
LGERAAFRLRERVAQTLSKAVGGLVPQAWRPVPVESVAAALVTAARVDAPGVRVLENPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCE
LAAQDERPVA
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]