| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pheC [H]
Identifier: 17547231
GI number: 17547231
Start: 2718791
End: 2719594
Strand: Direct
Name: pheC [H]
Synonym: RSc2512
Alternate gene names: 17547231
Gene position: 2718791-2719594 (Clockwise)
Preceding gene: 17547230
Following gene: 17547233
Centisome position: 73.16
GC content: 65.67
Gene sequence:
>804_bases ATGTTTGTCCGCTTCATCCGCAGCACCGCCCTGCTGCTGTGCGCCTGCGTTGCCGCGCCGGCCCTGGCGCAGGCCACCAA CCGCCTCGACGAGATCCTTGCGCGCGGCACGCTGCGCGTCGGCTCCACGGGCGACTACAAGCCCTTCAGCTACAAGACGC CCGGCGACGGCCGCTTCATCGGCCTGGACGTGGACATGGGCGAACGGCTGGCGAAGGCCCTCGGCGTGAAGCTGGAAGTG GTGCCGACCACGTGGTCGACGCTGATGCGCGATTTCGGCGAAGACCGCTTCGACATTGCCATGAGCGGCATCTCGGTGAC GCTGGAACGGCAGAAGAAGGCGTTCTATTCGATCCCGTACCAGCGCGACGGCAAGACGCCGATCGCCCGCTGCGAGAACC AGGACAAGTTCCAGACCCTGGAACAGATCGACCGGCCCGGCGTGCGGGCGGTGGTCAACCCGGGCGGCACCAACGAGAAG TTCGCGCGCGAACACCTGAAACAGGCGCAGATCCGCGTGTATCCGGACAACGTGACGATCTTCAACGAGATCATCGCCGG ACGCGCCGACCTGATGATGACCGATGCGGTCGAGACGCGGCTGCAGCAGAAGCTGCACCCGGAACTGTGCGCCGTGCATC CCGACGCGCCGTTCGATTTCTCTGAGAAGGCCTACCTGCTGCCGCGCGACGTGGTGTTCAAGAACTTCGTCGATCAGTGG CTGCGGCAGACGATGGAGAGCGGCGAGTTCGCGCGCCGCTTCGATGCCTGGCTGGCGTATCCGTGGAACGCGCCCGCCAA GTGA
Upstream 100 bases:
>100_bases CTGCAGTGGAACAAGGCCGCCGGCCAATCGAGCTAGCATGCGAAGGTGCGTGGCCCGGGTCGAGGCCGCGCCCGAGCCTT TTTCATTGACGGGAGTCCCC
Downstream 100 bases:
>100_bases ACTAAGCCGCGGCGGCCGGGACCGCCCCCGGCATCAGTGCAGCGCGGGTTGATTCCCGTGCTGCAGCGCCAGCGCATCGC GCAGCAGCGCATCGGTCATG
Product: cyclohexadienyl dehydratase precursor signal peptide protein
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFIGLDVDMGERLAKALGVKLEV VPTTWSTLMRDFGEDRFDIAMSGISVTLERQKKAFYSIPYQRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEK FAREHLKQAQIRVYPDNVTIFNEIIAGRADLMMTDAVETRLQQKLHPELCAVHPDAPFDFSEKAYLLPRDVVFKNFVDQW LRQTMESGEFARRFDAWLAYPWNAPAK
Sequences:
>Translated_267_residues MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFIGLDVDMGERLAKALGVKLEV VPTTWSTLMRDFGEDRFDIAMSGISVTLERQKKAFYSIPYQRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEK FAREHLKQAQIRVYPDNVTIFNEIIAGRADLMMTDAVETRLQQKLHPELCAVHPDAPFDFSEKAYLLPRDVVFKNFVDQW LRQTMESGEFARRFDAWLAYPWNAPAK >Mature_267_residues MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFIGLDVDMGERLAKALGVKLEV VPTTWSTLMRDFGEDRFDIAMSGISVTLERQKKAFYSIPYQRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEK FAREHLKQAQIRVYPDNVTIFNEIIAGRADLMMTDAVETRLQQKLHPELCAVHPDAPFDFSEKAYLLPRDVVFKNFVDQW LRQTMESGEFARRFDAWLAYPWNAPAK
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=186, Percent_Identity=29.5698924731183, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787031, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788648, Length=164, Percent_Identity=29.8780487804878, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788649, Length=165, Percent_Identity=28.4848484848485, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI171474010, Length=197, Percent_Identity=28.9340101522843, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 30242; Mature: 30242
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEE GLDVDMGERLAKALGVKLEVVPTTWSTLMRDFGEDRFDIAMSGISVTLERQKKAFYSIPY EEECCHHHHHHHHHCCEEEEECCCHHHHHHHHCCCHHHEEECCCEEEHHHHHHHHHCCCC QRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEKFAREHLKQAQIRVYPDNVTI CCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCCHHH FNEIIAGRADLMMTDAVETRLQQKLHPELCAVHPDAPFDFSEKAYLLPRDVVFKNFVDQW HHHHHHCCHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCEECHHHHHHHHHHHHH LRQTMESGEFARRFDAWLAYPWNAPAK HHHHHHCCHHHHHHHHHEECCCCCCCC >Mature Secondary Structure MFVRFIRSTALLLCACVAAPALAQATNRLDEILARGTLRVGSTGDYKPFSYKTPGDGRFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEE GLDVDMGERLAKALGVKLEVVPTTWSTLMRDFGEDRFDIAMSGISVTLERQKKAFYSIPY EEECCHHHHHHHHHCCEEEEECCCHHHHHHHHCCCHHHEEECCCEEEHHHHHHHHHCCCC QRDGKTPIARCENQDKFQTLEQIDRPGVRAVVNPGGTNEKFAREHLKQAQIRVYPDNVTI CCCCCCHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCCHHH FNEIIAGRADLMMTDAVETRLQQKLHPELCAVHPDAPFDFSEKAYLLPRDVVFKNFVDQW HHHHHHCCHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCEECHHHHHHHHHHHHH LRQTMESGEFARRFDAWLAYPWNAPAK HHHHHHCCHHHHHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]