Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17547230

Identifier: 17547230

GI number: 17547230

Start: 2718250

End: 2718726

Strand: Direct

Name: 17547230

Synonym: RSc2511

Alternate gene names: NA

Gene position: 2718250-2718726 (Clockwise)

Preceding gene: 17547227

Following gene: 17547231

Centisome position: 73.14

GC content: 67.09

Gene sequence:

>477_bases
ATGACCACTCGTGCGATCCGGCGCAAGCTGACCGCGCTTGCCTGGCTGCTGGCCGGCACCGCGCTTCCCGCCCTGGCGCA
GACGCCGTCCGTCCCCCAGGGAAACACCGTTGCCGCAACCGATGGCGGAATCGACGTCGTGCAGCTCAAGCCGGCGGTCG
AAGCCGTGGTCAACGCGGACTACCCGCACCTCAATGCGCGGTGCAAAGACCTGCATACGCATCCGGAGCCGGCCTTCCAG
GAAACGCGCACCGCCGCCCGGCTGGCCGCCGAGATGCGCAAGCTCGGCTTCGACGTGACGGAACAGATCGGCAGGACCGG
CGTGGCGGCGATCTATCGTAACGAGCCAGGGCCTACCGTCCTGGTGCGCACCGAGCTCGATGCCCTGCCGATGGAAGAAA
AGACCGGCGTCGAAGCCATGTCGCTCACGGTGATGCATACGCTGCAGTGGAACAAGGCCGCCGGCCAATCGAGCTAG

Upstream 100 bases:

>100_bases
GGGCTGCCCCGGAGGGCACCCGCCGGCATCCAGTGGCATCATCGATTCGCTTGACGAAGCAACAATATCGCATCGACACC
ATGCGATGCAAGGAGACCCC

Downstream 100 bases:

>100_bases
CATGCGAAGGTGCGTGGCCCGGGTCGAGGCCGCGCCCGAGCCTTTTTCATTGACGGGAGTCCCCATGTTTGTCCGCTTCA
TCCGCAGCACCGCCCTGCTG

Product: signal peptide protein

Products: NA

Alternate protein names: Peptidase; Zinc Metallopeptidase; Metal-Dependent Amidase/Aminoacylase/Carboxypeptidase; Amidohydrolase Family Protein; Amidohydrolase Subfamily; Hydrolase; N-Acyl-L-Amino Acid Amidohydrolase; M20 Subfamily Protein; Peptidase Protein; Hippurate Hydrolase; Amidohydrolase-Family Protein; Carboxypeptidase; Amidase/Aminoacylase/Peptidase Family Protein; Metal-Dependentamidase/Aminoacylase/Carboxypeptidase; Signal Peptide Protein; Hippurate Hydrolase Protein; LOW QUALITY PROTEIN Protein; Hyppurate Hydrolase Protein

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTTRAIRRKLTALAWLLAGTALPALAQTPSVPQGNTVAATDGGIDVVQLKPAVEAVVNADYPHLNARCKDLHTHPEPAFQ
ETRTAARLAAEMRKLGFDVTEQIGRTGVAAIYRNEPGPTVLVRTELDALPMEEKTGVEAMSLTVMHTLQWNKAAGQSS

Sequences:

>Translated_158_residues
MTTRAIRRKLTALAWLLAGTALPALAQTPSVPQGNTVAATDGGIDVVQLKPAVEAVVNADYPHLNARCKDLHTHPEPAFQ
ETRTAARLAAEMRKLGFDVTEQIGRTGVAAIYRNEPGPTVLVRTELDALPMEEKTGVEAMSLTVMHTLQWNKAAGQSS
>Mature_157_residues
TTRAIRRKLTALAWLLAGTALPALAQTPSVPQGNTVAATDGGIDVVQLKPAVEAVVNADYPHLNARCKDLHTHPEPAFQE
TRTAARLAAEMRKLGFDVTEQIGRTGVAAIYRNEPGPTVLVRTELDALPMEEKTGVEAMSLTVMHTLQWNKAAGQSS

Specific function: Unknown

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16966; Mature: 16834

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRAIRRKLTALAWLLAGTALPALAQTPSVPQGNTVAATDGGIDVVQLKPAVEAVVNAD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECHHHHHHHCCC
YPHLNARCKDLHTHPEPAFQETRTAARLAAEMRKLGFDVTEQIGRTGVAAIYRNEPGPTV
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCEE
LVRTELDALPMEEKTGVEAMSLTVMHTLQWNKAAGQSS
EEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTRAIRRKLTALAWLLAGTALPALAQTPSVPQGNTVAATDGGIDVVQLKPAVEAVVNAD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECHHHHHHHCCC
YPHLNARCKDLHTHPEPAFQETRTAARLAAEMRKLGFDVTEQIGRTGVAAIYRNEPGPTV
CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCCEE
LVRTELDALPMEEKTGVEAMSLTVMHTLQWNKAAGQSS
EEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA