Click here to switch to the map view.

The map label for this gene is 17547198

Identifier: 17547198

GI number: 17547198

Start: 2687724

End: 2688194

Strand: Reverse

Name: 17547198

Synonym: RSc2479

Alternate gene names: NA

Gene position: 2688194-2687724 (Counterclockwise)

Preceding gene: 17547199

Following gene: 17547197

Centisome position: 72.33

GC content: 63.91

Gene sequence:

>471_bases
ATGCGTGAATTTCATTCGATCGGAGCGTTTGTCGCCCATCTGGCGACGCTTGAGGGGCGGCTGGCATTGGACAGCCGCGA
GGCCCTCACCGACGCCGCCAAGCTGGTTGAAAAGCAAGCCAAAGCCGAGATCGGCACGTACCAACCGGCCGTAGGGCCAT
TCGCTGCGTGGCCGGAGCTGGCCGACAGCACGAAGGAAGACCGAGCGCGCAAGGGCTACCCGGAAAACGAGCCGTTGCTG
CGCACGGGCGACCTGCGGGACAGCATCTCCCATGAGGTGCATGGGCTGGAGGCCATCATCGGCTCCACGGAAGACGTGGC
GCTGTATCAGGAGTTGGGAACCCAGCATATCCCGCCGCGGCCGTTCCTCGGCACTGCAGCGGTGGTCAAGGAGAAGGAGA
TCGTGAAGCTGATCGGGGAACAGTTGGCCGGCACGCTCGCCGGTGTCCGCTACCGGATCAAGGGCGATTAA

Upstream 100 bases:

>100_bases
GCGTTCAGCCTGGAGGATCGGTATCGCCAGGCCTTCGCGATCATCGCAGGCGAGCTCAAGGGCGGCAAATTCAACTGGCA
AAACATGGAGTGGGACGGCG

Downstream 100 bases:

>100_bases
CCAGCCAGCACTTGGTACAGGACCATAAGCACCACGATCAGCACAGGGATGCCAACGATGAGGGAAACCGTCGAGACCGC
AAACAGGCCGACCACCTGCC

Product: bacteriophage-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MREFHSIGAFVAHLATLEGRLALDSREALTDAAKLVEKQAKAEIGTYQPAVGPFAAWPELADSTKEDRARKGYPENEPLL
RTGDLRDSISHEVHGLEAIIGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD

Sequences:

>Translated_156_residues
MREFHSIGAFVAHLATLEGRLALDSREALTDAAKLVEKQAKAEIGTYQPAVGPFAAWPELADSTKEDRARKGYPENEPLL
RTGDLRDSISHEVHGLEAIIGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
>Mature_156_residues
MREFHSIGAFVAHLATLEGRLALDSREALTDAAKLVEKQAKAEIGTYQPAVGPFAAWPELADSTKEDRARKGYPENEPLL
RTGDLRDSISHEVHGLEAIIGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16983; Mature: 16983

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFHSIGAFVAHLATLEGRLALDSREALTDAAKLVEKQAKAEIGTYQPAVGPFAAWPEL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHH
ADSTKEDRARKGYPENEPLLRTGDLRDSISHEVHGLEAIIGSTEDVALYQELGTQHIPPR
HCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
>Mature Secondary Structure
MREFHSIGAFVAHLATLEGRLALDSREALTDAAKLVEKQAKAEIGTYQPAVGPFAAWPEL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHH
ADSTKEDRARKGYPENEPLLRTGDLRDSISHEVHGLEAIIGSTEDVALYQELGTQHIPPR
HCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA