| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547195
Identifier: 17547195
GI number: 17547195
Start: 2684783
End: 2685169
Strand: Reverse
Name: 17547195
Synonym: RSc2476
Alternate gene names: NA
Gene position: 2685169-2684783 (Counterclockwise)
Preceding gene: 17547196
Following gene: 17547194
Centisome position: 72.25
GC content: 69.77
Gene sequence:
>387_bases ATGGGCCTGAGATCGAGGAACAAGGGCAAGGCCGGGGAGCGCGAGATTGCCGCCCTGGTGCGTGACCTGACCGGCTGGGA CGTGCGCCGGCGGGTGCGGCAGCACGAAGGGGATTACGATCTGGAAGGGGTGCCTGGGTGGGCGGTGGAGGTCAAGCGTC ATGCCAGCGCCTCCCGCTCCGATGTGCGCATGTGGTGGGAGCAAGCCGAGCGCCAGGCGCAAGGCGAAGAACTGCTGCCG GTGCTGTTCTATCGGCGCGACCGGGACGAATGGCGGGCGGTGTGGCCGGTGGGAACGGTACGGCGCGCCGATGCATGGCG TGGCTACGGCTGGACCGTGGAGGGATCGGTCGAGGCGTGGGCGGTGGTGGCGCGGGAGGGAGTGTGA
Upstream 100 bases:
>100_bases ATGGAGTTCATTGAGCGTTTCGGCGCCATGGACGAAGGCGAAATCCATGGGGCGATGGCCAGGAACGGCGTGCGTCTGGT TGGGCGTAGGAAGTGATGCC
Downstream 100 bases:
>100_bases GAGATGACGAAACCGACGAAGCAACCCAAACCCGCCAAGCGCACCCCGGAAGCCTTGGCAGTTACTGCAGAACCTAACGA AAAGCCGGAAGCCTCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MGLRSRNKGKAGEREIAALVRDLTGWDVRRRVRQHEGDYDLEGVPGWAVEVKRHASASRSDVRMWWEQAERQAQGEELLP VLFYRRDRDEWRAVWPVGTVRRADAWRGYGWTVEGSVEAWAVVAREGV
Sequences:
>Translated_128_residues MGLRSRNKGKAGEREIAALVRDLTGWDVRRRVRQHEGDYDLEGVPGWAVEVKRHASASRSDVRMWWEQAERQAQGEELLP VLFYRRDRDEWRAVWPVGTVRRADAWRGYGWTVEGSVEAWAVVAREGV >Mature_127_residues GLRSRNKGKAGEREIAALVRDLTGWDVRRRVRQHEGDYDLEGVPGWAVEVKRHASASRSDVRMWWEQAERQAQGEELLPV LFYRRDRDEWRAVWPVGTVRRADAWRGYGWTVEGSVEAWAVVAREGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14860; Mature: 14729
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRSRNKGKAGEREIAALVRDLTGWDVRRRVRQHEGDYDLEGVPGWAVEVKRHASASRS CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHH DVRMWWEQAERQAQGEELLPVLFYRRDRDEWRAVWPVGTVRRADAWRGYGWTVEGSVEAW HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHH AVVAREGV HHEECCCC >Mature Secondary Structure GLRSRNKGKAGEREIAALVRDLTGWDVRRRVRQHEGDYDLEGVPGWAVEVKRHASASRS CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHH DVRMWWEQAERQAQGEELLPVLFYRRDRDEWRAVWPVGTVRRADAWRGYGWTVEGSVEAW HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCHHH AVVAREGV HHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA