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The map label for this gene is yjeP [H]

Identifier: 17547170

GI number: 17547170

Start: 2657077

End: 2658420

Strand: Reverse

Name: yjeP [H]

Synonym: RSc2451

Alternate gene names: 17547170

Gene position: 2658420-2657077 (Counterclockwise)

Preceding gene: 17547171

Following gene: 17547169

Centisome position: 71.53

GC content: 66.59

Gene sequence:

>1344_bases
ATGAATGGATTGCCGTTGAACCACATCGCGCTGGGGCGCATGATCGGCGACATCGTCGACGATCTGGGCGGCCCGCGCTT
CATTTGGCAACTGGGGGTGCTGGCGCTGCTGCTCGGCGTGGCCTGGCTGGCGGCCCGGCCGATCGCACGGCGACTGCACG
CGCGTCACGCCGGCGACAGCTTTGCGCTGCGCTTTGCCTGGGCCAGCCTCGAGCGCGCCGTGTTTCCGCTGCTCGGTTGG
CTGCTGGTGCTCGCGGCACGCTATGCACTGACCGGCGTCATGCCGATCAGCGTGTTCCGGCTGGCCGTGGTGCCGCTGTT
CGGCCTGGCGATGCTGTATTTCGTGTTCTATGTGCTGCGTCGCGTGTTGTCCGCCAACGGCGATCTGCACGGGATGCTGG
TGCTGGTCGAGCGCGTGCTGACTACGCTGATGTGGATCGGCATGGTGCTCTACGTGGTGGGCGTGCTCAGCGATGTGGTC
AGCTATCTGGAGGGCATCCAGTTCTCGGTGGGCGGCAAGCAGAAGGTGAACCTGGCGGCCATGCTGATGGCCGTGGTGTG
GATCCTGCTGACGGTGCTGGTGGCCATGTGGTTCGGCTCGTGGCTCGACAGCCGCATCACCCGTGCCGCCGCGATCGACG
CCAACCTGAAGGTGGTGCTGTCGCGCGTGGCCAAGGCGGCGCTGCTGCTGGTGTCGCTGCTGCTGAGCCTGTCGCTGGTG
GGCATCGACCTGACGGTGCTGTCGGTGTTCGGCGGGGCGCTGGGCGTCGGGCTCGGCTTCGGCCTGCAGAAGATCGCCAG
CAACTATGTGTCGGGCTTCATCATCCTGCTGGAGCGCTCGCTCAAGCTCGGCGATCAGATCACGGTCAGCACGTACACCG
GCATCGTGACGCAGATCCGCACCCGCTATACCGTGGTGCGCAACGGCGACGGCGACACCTTCGTGCCGAATGAACTGATG
GTCGCCCAGGCGGTGCAGAACCACAATGAGCGCGGCACGGTTCGCGTGGCCGTGCGGGTGCAGGCCGCCTATCCGGCCGA
TCCCGAGGTCGTGCTTGGGCTGCTCGTCGCCTGCGCAGAAGGCGTTCCGCGCGTGCTGGCCGATCCGGCGCCGGCCGCGT
TCCTGGCCGCCTTTGCCGACAGCGGCATCGAGTATGAGCTGGGCGTATGGATCGCCGATCCGCACAACGGCAAGCTGGGC
GTGCAGTCCGACCTGAATCGGGCAATCTACAAGCGCTTCAAGGCGGCGGGCGTCGAGATTCCCTATCCGCAGCGGGAAGT
CCGCTTGCTGGGGCCGCTCGCGGTGCAGCAGTCGTCACTGAGTGATTCTGGCGCCGCATCGTAG

Upstream 100 bases:

>100_bases
CGTGCGCGGCGACGCCGACCTCGCGCAGCGCTACGCCGACAACTGGCAGAAGCACGCGGCCGACGCGCTGCCGTACCTGC
CTGACTAACCGACCGCTCCG

Downstream 100 bases:

>100_bases
CGTTGGTGTCGGTCCCTAGCACATCCTGCCGGGGAACGGTAAGTCTTTGTTTTCAGTCAAATTGGCGGTTTTCCCCCATA
GTCTAGAGGGGGCATTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MNGLPLNHIALGRMIGDIVDDLGGPRFIWQLGVLALLLGVAWLAARPIARRLHARHAGDSFALRFAWASLERAVFPLLGW
LLVLAARYALTGVMPISVFRLAVVPLFGLAMLYFVFYVLRRVLSANGDLHGMLVLVERVLTTLMWIGMVLYVVGVLSDVV
SYLEGIQFSVGGKQKVNLAAMLMAVVWILLTVLVAMWFGSWLDSRITRAAAIDANLKVVLSRVAKAALLLVSLLLSLSLV
GIDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLERSLKLGDQITVSTYTGIVTQIRTRYTVVRNGDGDTFVPNELM
VAQAVQNHNERGTVRVAVRVQAAYPADPEVVLGLLVACAEGVPRVLADPAPAAFLAAFADSGIEYELGVWIADPHNGKLG
VQSDLNRAIYKRFKAAGVEIPYPQREVRLLGPLAVQQSSLSDSGAAS

Sequences:

>Translated_447_residues
MNGLPLNHIALGRMIGDIVDDLGGPRFIWQLGVLALLLGVAWLAARPIARRLHARHAGDSFALRFAWASLERAVFPLLGW
LLVLAARYALTGVMPISVFRLAVVPLFGLAMLYFVFYVLRRVLSANGDLHGMLVLVERVLTTLMWIGMVLYVVGVLSDVV
SYLEGIQFSVGGKQKVNLAAMLMAVVWILLTVLVAMWFGSWLDSRITRAAAIDANLKVVLSRVAKAALLLVSLLLSLSLV
GIDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLERSLKLGDQITVSTYTGIVTQIRTRYTVVRNGDGDTFVPNELM
VAQAVQNHNERGTVRVAVRVQAAYPADPEVVLGLLVACAEGVPRVLADPAPAAFLAAFADSGIEYELGVWIADPHNGKLG
VQSDLNRAIYKRFKAAGVEIPYPQREVRLLGPLAVQQSSLSDSGAAS
>Mature_447_residues
MNGLPLNHIALGRMIGDIVDDLGGPRFIWQLGVLALLLGVAWLAARPIARRLHARHAGDSFALRFAWASLERAVFPLLGW
LLVLAARYALTGVMPISVFRLAVVPLFGLAMLYFVFYVLRRVLSANGDLHGMLVLVERVLTTLMWIGMVLYVVGVLSDVV
SYLEGIQFSVGGKQKVNLAAMLMAVVWILLTVLVAMWFGSWLDSRITRAAAIDANLKVVLSRVAKAALLLVSLLLSLSLV
GIDLTVLSVFGGALGVGLGFGLQKIASNYVSGFIILLERSLKLGDQITVSTYTGIVTQIRTRYTVVRNGDGDTFVPNELM
VAQAVQNHNERGTVRVAVRVQAAYPADPEVVLGLLVACAEGVPRVLADPAPAAFLAAFADSGIEYELGVWIADPHNGKLG
VQSDLNRAIYKRFKAAGVEIPYPQREVRLLGPLAVQQSSLSDSGAAS

Specific function: Unknown

COG id: COG3264

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI2367355, Length=275, Percent_Identity=29.8181818181818, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1786670, Length=192, Percent_Identity=34.8958333333333, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1789291, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 48134; Mature: 48134

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3042771 [H]