| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547126
Identifier: 17547126
GI number: 17547126
Start: 2612938
End: 2613135
Strand: Direct
Name: 17547126
Synonym: RSc2407
Alternate gene names: NA
Gene position: 2612938-2613135 (Clockwise)
Preceding gene: 17547123
Following gene: 17547131
Centisome position: 70.31
GC content: 66.16
Gene sequence:
>198_bases GTGACCACCAAGCTGTTCGGCTACACGAGCTATGCGATCCGCGAGGTGCGCGTGAGCGAAGGCAGCACGCCGAGCTCGCG CACGTGGGCCCTCAGGGCCGCCGCAATGACCGACTCGTCTCCGGTACCGGTACCCATCGAGGGCGGCAAGGCGCAAGTCA CGGTGACCGTCTCCGGTGCCGTGCAGATGTTGAAGTAG
Upstream 100 bases:
>100_bases GTCTTCCTCTCCGAAAACGGACTCTACTAGCTTCCCGGTGGACCGGTTTATTGGGGGCAGGTCAGACCAGGCCGTCAGCA CTTTCCGCGACAAGGCGCAG
Downstream 100 bases:
>100_bases CGGACCCGCCAGCCATGAGAAAAGTCACCGCAAGCGGTTAATGCCGTTCAGCTAAGGCAAAAAAGGCCGCTCCGATTAAC GTCGGATGAACTGACCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MTTKLFGYTSYAIREVRVSEGSTPSSRTWALRAAAMTDSSPVPVPIEGGKAQVTVTVSGAVQMLK
Sequences:
>Translated_65_residues MTTKLFGYTSYAIREVRVSEGSTPSSRTWALRAAAMTDSSPVPVPIEGGKAQVTVTVSGAVQMLK >Mature_64_residues TTKLFGYTSYAIREVRVSEGSTPSSRTWALRAAAMTDSSPVPVPIEGGKAQVTVTVSGAVQMLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6875; Mature: 6744
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKLFGYTSYAIREVRVSEGSTPSSRTWALRAAAMTDSSPVPVPIEGGKAQVTVTVSGA CCEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEECCCCEEEEEEECCE VQMLK EEECC >Mature Secondary Structure TTKLFGYTSYAIREVRVSEGSTPSSRTWALRAAAMTDSSPVPVPIEGGKAQVTVTVSGA CEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEECCCCEEEEEEECCE VQMLK EEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA