| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547121
Identifier: 17547121
GI number: 17547121
Start: 2609715
End: 2610032
Strand: Direct
Name: 17547121
Synonym: RSc2402
Alternate gene names: NA
Gene position: 2609715-2610032 (Clockwise)
Preceding gene: 17547120
Following gene: 17547122
Centisome position: 70.22
GC content: 66.67
Gene sequence:
>318_bases ATGAGCAGTAAGCAGATCGAAGTGAACATCGCCGGGCAGGCGTACAAGTTCTCCGTATCGCCCGACAACGAAGCCGCACT GCGCGAAGCCGCCGCCATGGTCGACACGCAGATGATGCGCATCCGGAACAGCTCGACCACCAAGGGCATCGAGCGCATGG CCGTGATGGCCGCCATCAGCATCGCCTCCGATCTGCTGGCGGTGCAGCGCCAAGCCGCGGCCGACGCCGCGCTGCCGATC GACGCCATCCGCGCCAAGCTGGCCGACCTGAATGCGCGGGCCGACGAAGCGCTGCGCCAGTACGGCGAAGCGGCGTAA
Upstream 100 bases:
>100_bases ATTCTCGACAAGCTGCCGACCGGCTCCGACGCCCGCCAGCTCGACCTCCTCGGCCAGCCCGCAGGCGAATCCGCCCCCGC CCCGCATCCGGAGACCCCGC
Downstream 100 bases:
>100_bases TCACAAACGCAACGACGTCCGCTTGTCTTTGTAACCGGATCGCATCCGGGCTTGGGTTCGGATGCGAACAGGTGTATAGT GTGTCCCAACGGCTTCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSSKQIEVNIAGQAYKFSVSPDNEAALREAAAMVDTQMMRIRNSSTTKGIERMAVMAAISIASDLLAVQRQAAADAALPI DAIRAKLADLNARADEALRQYGEAA
Sequences:
>Translated_105_residues MSSKQIEVNIAGQAYKFSVSPDNEAALREAAAMVDTQMMRIRNSSTTKGIERMAVMAAISIASDLLAVQRQAAADAALPI DAIRAKLADLNARADEALRQYGEAA >Mature_104_residues SSKQIEVNIAGQAYKFSVSPDNEAALREAAAMVDTQMMRIRNSSTTKGIERMAVMAAISIASDLLAVQRQAAADAALPID AIRAKLADLNARADEALRQYGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11182; Mature: 11051
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKQIEVNIAGQAYKFSVSPDNEAALREAAAMVDTQMMRIRNSSTTKGIERMAVMAAIS CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IASDLLAVQRQAAADAALPIDAIRAKLADLNARADEALRQYGEAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure SSKQIEVNIAGQAYKFSVSPDNEAALREAAAMVDTQMMRIRNSSTTKGIERMAVMAAIS CCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IASDLLAVQRQAAADAALPIDAIRAKLADLNARADEALRQYGEAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA