| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547120
Identifier: 17547120
GI number: 17547120
Start: 2609405
End: 2609725
Strand: Direct
Name: 17547120
Synonym: RSc2401
Alternate gene names: NA
Gene position: 2609405-2609725 (Clockwise)
Preceding gene: 17547113
Following gene: 17547121
Centisome position: 70.21
GC content: 67.29
Gene sequence:
>321_bases ATGCTGAACGAACTCGAACAACTTGCCGACAAGATTGCGCGCGTGCTGCGTCACGCCGACGCCCTTGCCGCCGAGAATCA GCGCCTGCGCGCCGAAGTCGAACGGCTCCAGGCGGAAGCCGAGATCGCCAGGACCGAGCGCGACGCCATGGTGGCCGACC GCAGCGTGCTCAACGCCAAGATCGAAGAAGCGCAACTGCGCATCCAGTCGATTCTCGACAAGCTGCCGACCGGCTCCGAC GCCCGCCAGCTCGACCTCCTCGGCCAGCCCGCAGGCGAATCCGCCCCCGCCCCGCATCCGGAGACCCCGCATGAGCAGTA A
Upstream 100 bases:
>100_bases GGTGCCCTACCCGCCGCCCCGCCCCGCGCATCCGTACGGAGGACAGGCGCGGTCGCGGCGATCGGCTAAAATCCCCCCAC TCGATTCCGATTGACAAACG
Downstream 100 bases:
>100_bases GCAGATCGAAGTGAACATCGCCGGGCAGGCGTACAAGTTCTCCGTATCGCCCGACAACGAAGCCGCACTGCGCGAAGCCG CCGCCATGGTCGACACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLNELEQLADKIARVLRHADALAAENQRLRAEVERLQAEAEIARTERDAMVADRSVLNAKIEEAQLRIQSILDKLPTGSD ARQLDLLGQPAGESAPAPHPETPHEQ
Sequences:
>Translated_106_residues MLNELEQLADKIARVLRHADALAAENQRLRAEVERLQAEAEIARTERDAMVADRSVLNAKIEEAQLRIQSILDKLPTGSD ARQLDLLGQPAGESAPAPHPETPHEQ >Mature_106_residues MLNELEQLADKIARVLRHADALAAENQRLRAEVERLQAEAEIARTERDAMVADRSVLNAKIEEAQLRIQSILDKLPTGSD ARQLDLLGQPAGESAPAPHPETPHEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11721; Mature: 11721
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNELEQLADKIARVLRHADALAAENQRLRAEVERLQAEAEIARTERDAMVADRSVLNAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEAQLRIQSILDKLPTGSDARQLDLLGQPAGESAPAPHPETPHEQ HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLNELEQLADKIARVLRHADALAAENQRLRAEVERLQAEAEIARTERDAMVADRSVLNAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEEAQLRIQSILDKLPTGSDARQLDLLGQPAGESAPAPHPETPHEQ HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA