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The map label for this gene is ytfM [H]

Identifier: 17547103

GI number: 17547103

Start: 2591885

End: 2593654

Strand: Reverse

Name: ytfM [H]

Synonym: RSc2384

Alternate gene names: 17547103

Gene position: 2593654-2591885 (Counterclockwise)

Preceding gene: 17547108

Following gene: 17547102

Centisome position: 69.79

GC content: 69.72

Gene sequence:

>1770_bases
ATGACCGGCCGCCAACGACCGTCACGCTTCCGTCTTCTTGCCACGCCCGCCGCCGCGCTGCTCGCCGGCTGCGTCCTGTC
CGTCGCCTGCACGGCCGCCCGCGCCGCCTACGAGGTCAGGATCGAGGCGCCCAGGCCGCTGCGGGACCTGCTGGAGCGCC
ACCTGGACCTGGCCCGCTACCAGGACCGCAAGGACATCACCGACGATCAGTTGCAGTACATGGTCGAGACCATCGGCGAG
CAGGTCACCAAGCTGACCGCCACCGAGGGCTATTTCGTGCCCAAGGCGACCGCGCAGCTCGAAGGGCCGCCCGAGCGCCG
CACCGTGCGCGTCAAGGTGGAGGCCGGGCCGCGCACCACCATCGACAGCGTCGCGCTGGACTTCACCGGCGCCATCGCGC
AGGAGCCCAAGCGCATCGACGCGCTGAAGAAGGCCTGGGGCCTGCCGCAGGGGGCGCCATTCCGCCAGTCCGGCTGGGAC
AAGGCCAAGGAAGACAGCCTGGCCGCCCTGCAGAGCAAGCGCTACTACGCGGCCAGGCAGACGGCATCGCAGGCGCGCGT
CGACCCCGACGAGAACAAGGCCGATCTGTCGGTCGCCTACGACAGCGGGCCGGCCTACACGCTGGGGCCGCTGGATGTGC
AGGGCCTGTCGCGCTATCCGCGCAGCATCATCGACCATGTGAATCCGCTCATCGTGGGCGAGGACTATTCGGCCGACCGG
CTGCAGGCGCTGGCCGCGGCCATCCAGGGCCAGCCGTATTTCGCCAACGCGATCGTCGACCTGGGCGACGATCCGAACAA
TCCGGTCGCGGCGCCGGTGCGCGTGCGGGTGCGCGAATATCCGCCCAACCGCATCACCAGCGGGGTCGGCTACAGCACCG
ATACCGGCGCGCAGGTGGAAGGGCGCTACCAGTATCTGAACCTGTTCGACAAGGCCTGGGTGCTGGACACCCAGGCGCGC
ATCGAGCAGCGCCGCCAGTACCTGTTCGGTAGCGTGACCCTGCCGCCGGACGGCAAGCGCTATGTCAACAGCCTCTACGG
CAGCCTCGACCGCACCAACCTGTCGGGCACCGACACGCGCAGCTACCGCTCCGGCTTCAAGCAGACGCGCGTGCGCGGCA
TCTACGAAACCTCGTTCACGATCGACTTCTACTACGACGACCTGCGCCCCGAAGGCGCCGCGCGCGAGCTGAGCAAGGCG
CTGGTGCCGGGCTTCGCCTGGACGCGCCGCGACGTGGACGACCCGCTGTTCCCGCGCCGCGGCAACATCCTCACCACGCA
GATCGGCGCGGCGGTGAAGGGGCTGCTGACCGACCAGTCGTTCGTGCGCTCGTACAGCCGCATCCGCCAGTACGTGCCGG
TCGGGCAGCGCGACATCTTCGTCGCGCGCGCGGAACTGGGCGCGGTGCTCACCGCGGGCGCCGCCGACGGGGTGCCGGCC
ACGCTGCGCTTTCGCACCGGCGGCACGCAGTCCATCCGCGGCTACGATTTCCAGAGCATCGGCAACGATGTCAACGGCAG
CACGCTGCCGACCAAGTTCCTCGTCACCGGCGGGGTGGAGTACCAGCGCTGGTTCCTGCCGCAATGGGGCGCCGCGGTGT
TCTGGGACACCGGCACCGCCACCGACAACTGGACGCAGCGCCGGTGGTTCAACGGCGTGGGTGTCGGCGTGCGCTGGAAG
AGTCCGGTCGGCCCGATCCAGCTGGACCTGGCCTACGGCATCCAGCAGCACCAGTTCCGTCCGAGCGTGGCGCTCGGCAT
CGCGTTCTGA

Upstream 100 bases:

>100_bases
GGCCGGTTGCAATTGCCCGGGCACCGGCCGGGGCCGGTATGGTCAAATAACACCTTTCCGTCGACTCGCCGGCGCAGGGT
GCCGGCGCCCACCCGCCAGG

Downstream 100 bases:

>100_bases
GGGCGGCGGCGATGGACGCGCACACACCCGAACCCACCCGGCCGGACGCACCGATTCCGCCCGGGCGCGGCTGGGGTCGC
CGGCTTCTGCGCTGGGCGGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTGRQRPSRFRLLATPAAALLAGCVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGE
QVTKLTATEGYFVPKATAQLEGPPERRTVRVKVEAGPRTTIDSVALDFTGAIAQEPKRIDALKKAWGLPQGAPFRQSGWD
KAKEDSLAALQSKRYYAARQTASQARVDPDENKADLSVAYDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADR
LQALAAAIQGQPYFANAIVDLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVEGRYQYLNLFDKAWVLDTQAR
IEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFTIDFYYDDLRPEGAARELSKA
LVPGFAWTRRDVDDPLFPRRGNILTTQIGAAVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPA
TLRFRTGGTQSIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTATDNWTQRRWFNGVGVGVRWK
SPVGPIQLDLAYGIQQHQFRPSVALGIAF

Sequences:

>Translated_589_residues
MTGRQRPSRFRLLATPAAALLAGCVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGE
QVTKLTATEGYFVPKATAQLEGPPERRTVRVKVEAGPRTTIDSVALDFTGAIAQEPKRIDALKKAWGLPQGAPFRQSGWD
KAKEDSLAALQSKRYYAARQTASQARVDPDENKADLSVAYDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADR
LQALAAAIQGQPYFANAIVDLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVEGRYQYLNLFDKAWVLDTQAR
IEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFTIDFYYDDLRPEGAARELSKA
LVPGFAWTRRDVDDPLFPRRGNILTTQIGAAVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPA
TLRFRTGGTQSIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTATDNWTQRRWFNGVGVGVRWK
SPVGPIQLDLAYGIQQHQFRPSVALGIAF
>Mature_588_residues
TGRQRPSRFRLLATPAAALLAGCVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARYQDRKDITDDQLQYMVETIGEQ
VTKLTATEGYFVPKATAQLEGPPERRTVRVKVEAGPRTTIDSVALDFTGAIAQEPKRIDALKKAWGLPQGAPFRQSGWDK
AKEDSLAALQSKRYYAARQTASQARVDPDENKADLSVAYDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADRL
QALAAAIQGQPYFANAIVDLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVEGRYQYLNLFDKAWVLDTQARI
EQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTRSYRSGFKQTRVRGIYETSFTIDFYYDDLRPEGAARELSKAL
VPGFAWTRRDVDDPLFPRRGNILTTQIGAAVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPAT
LRFRTGGTQSIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTATDNWTQRRWFNGVGVGVRWKS
PVGPIQLDLAYGIQQHQFRPSVALGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=583, Percent_Identity=26.0720411663808, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 65308; Mature: 65177

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRQRPSRFRLLATPAAALLAGCVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARY
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHH
QDRKDITDDQLQYMVETIGEQVTKLTATEGYFVPKATAQLEGPPERRTVRVKVEAGPRTT
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEECCCCHHCCCCCCCCCEEEEEEECCCCCC
IDSVALDFTGAIAQEPKRIDALKKAWGLPQGAPFRQSGWDKAKEDSLAALQSKRYYAARQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TASQARVDPDENKADLSVAYDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADR
HHHHCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHH
LQALAAAIQGQPYFANAIVDLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVE
HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCC
GRYQYLNLFDKAWVLDTQARIEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTR
CHHHHHHHHHHHHEECHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH
SYRSGFKQTRVRGIYETSFTIDFYYDDLRPEGAARELSKALVPGFAWTRRDVDDPLFPRR
HHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GNILTTQIGAAVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPA
CCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCEEEECCCCCCCCE
TLRFRTGGTQSIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTA
EEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCHHEEECCCCCCEEEEECCCC
TDNWTQRRWFNGVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF
CCCCHHHHHHCCCCCCEEECCCCCCEEEEHHHCCHHHCCCCCEEEEECC
>Mature Secondary Structure 
TGRQRPSRFRLLATPAAALLAGCVLSVACTAARAAYEVRIEAPRPLRDLLERHLDLARY
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHH
QDRKDITDDQLQYMVETIGEQVTKLTATEGYFVPKATAQLEGPPERRTVRVKVEAGPRTT
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCEECCCCHHCCCCCCCCCEEEEEEECCCCCC
IDSVALDFTGAIAQEPKRIDALKKAWGLPQGAPFRQSGWDKAKEDSLAALQSKRYYAARQ
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TASQARVDPDENKADLSVAYDSGPAYTLGPLDVQGLSRYPRSIIDHVNPLIVGEDYSADR
HHHHCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHH
LQALAAAIQGQPYFANAIVDLGDDPNNPVAAPVRVRVREYPPNRITSGVGYSTDTGAQVE
HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCC
GRYQYLNLFDKAWVLDTQARIEQRRQYLFGSVTLPPDGKRYVNSLYGSLDRTNLSGTDTR
CHHHHHHHHHHHHEECHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCCCCCCH
SYRSGFKQTRVRGIYETSFTIDFYYDDLRPEGAARELSKALVPGFAWTRRDVDDPLFPRR
HHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GNILTTQIGAAVKGLLTDQSFVRSYSRIRQYVPVGQRDIFVARAELGAVLTAGAADGVPA
CCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCEEEECCCCCCCCE
TLRFRTGGTQSIRGYDFQSIGNDVNGSTLPTKFLVTGGVEYQRWFLPQWGAAVFWDTGTA
EEEEECCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCHHEEECCCCCCEEEEECCCC
TDNWTQRRWFNGVGVGVRWKSPVGPIQLDLAYGIQQHQFRPSVALGIAF
CCCCHHHHHHCCCCCCEEECCCCCCEEEEHHHCCHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]