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The map label for this gene is fdhD [H]

Identifier: 17547086

GI number: 17547086

Start: 2571326

End: 2572201

Strand: Reverse

Name: fdhD [H]

Synonym: RSc2367

Alternate gene names: 17547086

Gene position: 2572201-2571326 (Counterclockwise)

Preceding gene: 17547087

Following gene: 17547085

Centisome position: 69.21

GC content: 69.75

Gene sequence:

>876_bases
ATGCCGCTGCGCCCCGAACTGACCAACGCCTGCGTGCCGCTGCTCGATGAAGTCGAGGTCGTCGACGAGCTGGGCCACGT
GCGCGCCGTGCACATCCCCGGCGAGCGGCCGCTGACGGTCTATCTGGACAAGCGCGAGCTGGTCACGCTGATGACGCTGG
GCGGCGCCCCCGAGGCGCTGGTGCTCGGCTACCTGCGCAACCAGCGGCTGGTCGGCAGCATCGAGGACATCGCGTCCGTG
CAGGTGGACTGGGAGACCGAGTCCGCCGCCGTCACCACCCGCGCCGGCATCCCCGACCTGGACGAGAAGACCGCGCGCCG
CACCGTCACCACCGGCTGCGGGCAGGGCACCGTGTTCGGTTCGCTGATGGACGAGATCGATGCCGTCCACCTGCCGCCCG
AGGCACGCATCACGCAGACCACGCTGTACCGCGTGGTCGACACCATCCGGCTGCAGCAGTCGATCTACAAGCAGGCGGGT
TCGGTGCACGGCTGCGCCTTGTTCGATGCGCAGGGCGAGCTGCTGATGTTCATCGAGGACGTGGGCCGCCACAACGCCGT
CGACGCCATCGCCGGCCGCATGTGGCTGGAGGACATGGCGGGCGGCGACAAGGTCTTCTACACCACCGGGCGCCTGACTT
CCGAGATGGTCATCAAGGGCGCGCAGATGGGCATCCCGTTCCTGCTGTCGCGCTCGGGCGTCACGCAGATGGGCTACCGG
ATGGCGCAGCGGGTCAACCTGACGCTGTTCGCGCGCTGCACCGGGCGGCATTTCCTGCTGTACACCGGGCGCGAGCGCTT
CATCGCGGAGCCCGGCATGGCGGCCGTGGTCGGCCCGCGCGGGGAACTGCCGCAGCCGGCGGAATCCGGCCGATAA

Upstream 100 bases:

>100_bases
AACTGACGCCCGCACGCGGCGCCCGTTCTGGAATGGATGGGCGCCGGCCGCATGCAGGAATGCGCACGCTGCCGTGCGCA
TTTTTTTTGGATACCGCTCC

Downstream 100 bases:

>100_bases
GCCGCGGGCCGGCCGGTCCGCGCGCACGCGGTTTTCCGTCACGGGTTTGGGGGTACAATCCGCGTTTTCGAGCGCCGCCG
GCCCGAGCGCCGCGACCCAG

Product: FDHD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPLRPELTNACVPLLDEVEVVDELGHVRAVHIPGERPLTVYLDKRELVTLMTLGGAPEALVLGYLRNQRLVGSIEDIASV
QVDWETESAAVTTRAGIPDLDEKTARRTVTTGCGQGTVFGSLMDEIDAVHLPPEARITQTTLYRVVDTIRLQQSIYKQAG
SVHGCALFDAQGELLMFIEDVGRHNAVDAIAGRMWLEDMAGGDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYR
MAQRVNLTLFARCTGRHFLLYTGRERFIAEPGMAAVVGPRGELPQPAESGR

Sequences:

>Translated_291_residues
MPLRPELTNACVPLLDEVEVVDELGHVRAVHIPGERPLTVYLDKRELVTLMTLGGAPEALVLGYLRNQRLVGSIEDIASV
QVDWETESAAVTTRAGIPDLDEKTARRTVTTGCGQGTVFGSLMDEIDAVHLPPEARITQTTLYRVVDTIRLQQSIYKQAG
SVHGCALFDAQGELLMFIEDVGRHNAVDAIAGRMWLEDMAGGDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYR
MAQRVNLTLFARCTGRHFLLYTGRERFIAEPGMAAVVGPRGELPQPAESGR
>Mature_290_residues
PLRPELTNACVPLLDEVEVVDELGHVRAVHIPGERPLTVYLDKRELVTLMTLGGAPEALVLGYLRNQRLVGSIEDIASVQ
VDWETESAAVTTRAGIPDLDEKTARRTVTTGCGQGTVFGSLMDEIDAVHLPPEARITQTTLYRVVDTIRLQQSIYKQAGS
VHGCALFDAQGELLMFIEDVGRHNAVDAIAGRMWLEDMAGGDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYRM
AQRVNLTLFARCTGRHFLLYTGRERFIAEPGMAAVVGPRGELPQPAESGR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=262, Percent_Identity=27.0992366412214, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31853; Mature: 31722

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRPELTNACVPLLDEVEVVDELGHVRAVHIPGERPLTVYLDKRELVTLMTLGGAPEAL
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCHHH
VLGYLRNQRLVGSIEDIASVQVDWETESAAVTTRAGIPDLDEKTARRTVTTGCGQGTVFG
HHHHHHCCCHHCCHHHHHEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHH
SLMDEIDAVHLPPEARITQTTLYRVVDTIRLQQSIYKQAGSVHGCALFDAQGELLMFIED
HHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEC
VGRHNAVDAIAGRMWLEDMAGGDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYR
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHH
MAQRVNLTLFARCTGRHFLLYTGRERFIAEPGMAAVVGPRGELPQPAESGR
HHHHCCEEEEEEECCCEEEEEECCHHEECCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PLRPELTNACVPLLDEVEVVDELGHVRAVHIPGERPLTVYLDKRELVTLMTLGGAPEAL
CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCHHH
VLGYLRNQRLVGSIEDIASVQVDWETESAAVTTRAGIPDLDEKTARRTVTTGCGQGTVFG
HHHHHHCCCHHCCHHHHHEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCHHHH
SLMDEIDAVHLPPEARITQTTLYRVVDTIRLQQSIYKQAGSVHGCALFDAQGELLMFIED
HHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEC
VGRHNAVDAIAGRMWLEDMAGGDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYR
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHH
MAQRVNLTLFARCTGRHFLLYTGRERFIAEPGMAAVVGPRGELPQPAESGR
HHHHCCEEEEEEECCCEEEEEECCHHEECCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]