Click here to switch to the map view.

The map label for this gene is 17547025

Identifier: 17547025

GI number: 17547025

Start: 2506383

End: 2506913

Strand: Reverse

Name: 17547025

Synonym: RSc2306

Alternate gene names: NA

Gene position: 2506913-2506383 (Counterclockwise)

Preceding gene: 17547026

Following gene: 17547024

Centisome position: 67.46

GC content: 67.04

Gene sequence:

>531_bases
ATGATGTCGCCTCTCAACATCGACTTCGCGCGGCGCCGGACCGGCCCGACCACGGCCGGGGTTGCGCTGGTGATCGCAGC
CGCCTTGCTGCTGCTGTTCGCGGGCGATGCGCTGTGGCGTGCCTACCGCAACAACGACCGCGCCCGCGCCGAACTCGCCG
CGGTGGCGGCGAGCGCGCCGGTCAAGACGCGCGCCGCAAAGCTGGAGCCGACCGCGCTCGAGAAACGGACGGCCAAGGAC
AGCCGTGCCGTGCTGTCCGAACTGACCGTGCCATGGCAGGACCTGCTGGCCATCGTGGAAGGGTATCGCGGGCACGACGT
GGCACTGATCGGCATCGACCAGATGCCCGCGCAAGGCCAGATCCGCATCACGGCGGAAGCGAAGGATTTCGAGGCCTTGA
TCGGCTATCTCAAGTATCTGCAGGAAAGCCGGCTGTTGCGCGAGGCGGCGCTGAACACGCACCTGATCGAAACGACGGTG
CCGGGTGTGCCGGTGCGATTCCAGGTCACCGCGGTGTGGAGAAAACCATGA

Upstream 100 bases:

>100_bases
TCGACCCCCGGCAGTTCGACCCGTGCTTCGAGCGTGTCCATCCGCTGACGGGCCACATCAGCGGCCACGCTCCCGCACGA
TGCCTGATGAGGTTCGCGCA

Downstream 100 bases:

>100_bases
GCGCGACCGGGCTGCGCGATCCGCTGTTGGCCGTGCAATTCGCCTTGCGGCGCGGGTTCGGCTGGACGGGGCTGGCCGGT
GCCGTGCTGCTGGCCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMSPLNIDFARRRTGPTTAGVALVIAAALLLLFAGDALWRAYRNNDRARAELAAVAASAPVKTRAAKLEPTALEKRTAKD
SRAVLSELTVPWQDLLAIVEGYRGHDVALIGIDQMPAQGQIRITAEAKDFEALIGYLKYLQESRLLREAALNTHLIETTV
PGVPVRFQVTAVWRKP

Sequences:

>Translated_176_residues
MMSPLNIDFARRRTGPTTAGVALVIAAALLLLFAGDALWRAYRNNDRARAELAAVAASAPVKTRAAKLEPTALEKRTAKD
SRAVLSELTVPWQDLLAIVEGYRGHDVALIGIDQMPAQGQIRITAEAKDFEALIGYLKYLQESRLLREAALNTHLIETTV
PGVPVRFQVTAVWRKP
>Mature_176_residues
MMSPLNIDFARRRTGPTTAGVALVIAAALLLLFAGDALWRAYRNNDRARAELAAVAASAPVKTRAAKLEPTALEKRTAKD
SRAVLSELTVPWQDLLAIVEGYRGHDVALIGIDQMPAQGQIRITAEAKDFEALIGYLKYLQESRLLREAALNTHLIETTV
PGVPVRFQVTAVWRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19285; Mature: 19285

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSPLNIDFARRRTGPTTAGVALVIAAALLLLFAGDALWRAYRNNDRARAELAAVAASAP
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
VKTRAAKLEPTALEKRTAKDSRAVLSELTVPWQDLLAIVEGYRGHDVALIGIDQMPAQGQ
CHHHHHCCCCHHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCE
IRITAEAKDFEALIGYLKYLQESRLLREAALNTHLIETTVPGVPVRFQVTAVWRKP
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MMSPLNIDFARRRTGPTTAGVALVIAAALLLLFAGDALWRAYRNNDRARAELAAVAASAP
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
VKTRAAKLEPTALEKRTAKDSRAVLSELTVPWQDLLAIVEGYRGHDVALIGIDQMPAQGQ
CHHHHHCCCCHHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCE
IRITAEAKDFEALIGYLKYLQESRLLREAALNTHLIETTVPGVPVRFQVTAVWRKP
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA