| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17547024
Identifier: 17547024
GI number: 17547024
Start: 2505820
End: 2506386
Strand: Reverse
Name: 17547024
Synonym: RSc2305
Alternate gene names: NA
Gene position: 2506386-2505820 (Counterclockwise)
Preceding gene: 17547025
Following gene: 17547023
Centisome position: 67.44
GC content: 70.55
Gene sequence:
>567_bases ATGAGCGCGACCGGGCTGCGCGATCCGCTGTTGGCCGTGCAATTCGCCTTGCGGCGCGGGTTCGGCTGGACGGGGCTGGC CGGTGCCGTGCTGCTGGCCGTGGCCGCCGCAGCGCGGCTGGCCACGCCCGCGCTCGAATCCGGCACGCGCGAGCTGCATC ACCAGGCGCAACTGGCGCGCGCCGCGGCGGCGCAGGCGACCGCGCATGCGGCGCGCGCCGACTCGGATGCACAGTTGCTG GACACATTGCCCGAACGGTTCCCGCTCTTTGCCCAGAGCAGCGACGACGTGGCGACGATCCTGGCGCAGGCGCGCGCGGT GAATCTCACCCTCGGCTCCGCGCAGTATCAGATCGGGGCCGATCGCTCCGGCGCGTACACGACCTACCAGGTGCTGCTGC CGGTCAAGGACCGTTATGTCGCGATCCGGCGTTTCGTGGCGCTGGTGCTGAACAGCCTGCCCAACGCCGCGCTGCAGGAG ATTCACGTCGAGCGGCCCGCGGTCAGCGGCGATGTGCTGGACGCGCGCATCCGGTTTGATCTGATCTACCGGGCGAGCCG ATCATGA
Upstream 100 bases:
>100_bases GCCGGCTGTTGCGCGAGGCGGCGCTGAACACGCACCTGATCGAAACGACGGTGCCGGGTGTGCCGGTGCGATTCCAGGTC ACCGCGGTGTGGAGAAAACC
Downstream 100 bases:
>100_bases GACCGACCCTCGTCATGCGCAGCCTGGCCGGCGTGGCGGTGATTGCCATCGCCGCGCTGTCCTATTGGATCGGCGTGCAG CGCCTGCACGCGTCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSATGLRDPLLAVQFALRRGFGWTGLAGAVLLAVAAAARLATPALESGTRELHHQAQLARAAAAQATAHAARADSDAQLL DTLPERFPLFAQSSDDVATILAQARAVNLTLGSAQYQIGADRSGAYTTYQVLLPVKDRYVAIRRFVALVLNSLPNAALQE IHVERPAVSGDVLDARIRFDLIYRASRS
Sequences:
>Translated_188_residues MSATGLRDPLLAVQFALRRGFGWTGLAGAVLLAVAAAARLATPALESGTRELHHQAQLARAAAAQATAHAARADSDAQLL DTLPERFPLFAQSSDDVATILAQARAVNLTLGSAQYQIGADRSGAYTTYQVLLPVKDRYVAIRRFVALVLNSLPNAALQE IHVERPAVSGDVLDARIRFDLIYRASRS >Mature_187_residues SATGLRDPLLAVQFALRRGFGWTGLAGAVLLAVAAAARLATPALESGTRELHHQAQLARAAAAQATAHAARADSDAQLLD TLPERFPLFAQSSDDVATILAQARAVNLTLGSAQYQIGADRSGAYTTYQVLLPVKDRYVAIRRFVALVLNSLPNAALQEI HVERPAVSGDVLDARIRFDLIYRASRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20087; Mature: 19956
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATGLRDPLLAVQFALRRGFGWTGLAGAVLLAVAAAARLATPALESGTRELHHQAQLAR CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAAAQATAHAARADSDAQLLDTLPERFPLFAQSSDDVATILAQARAVNLTLGSAQYQIGA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEECC DRSGAYTTYQVLLPVKDRYVAIRRFVALVLNSLPNAALQEIHVERPAVSGDVLDARIRFD CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH LIYRASRS HEEECCCC >Mature Secondary Structure SATGLRDPLLAVQFALRRGFGWTGLAGAVLLAVAAAARLATPALESGTRELHHQAQLAR CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAAAQATAHAARADSDAQLLDTLPERFPLFAQSSDDVATILAQARAVNLTLGSAQYQIGA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCEEEECC DRSGAYTTYQVLLPVKDRYVAIRRFVALVLNSLPNAALQEIHVERPAVSGDVLDARIRFD CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH LIYRASRS HEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA