| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is folE2
Identifier: 17546939
GI number: 17546939
Start: 2407469
End: 2408275
Strand: Reverse
Name: folE2
Synonym: RSc2220
Alternate gene names: 17546939
Gene position: 2408275-2407469 (Counterclockwise)
Preceding gene: 17546940
Following gene: 17546937
Centisome position: 64.8
GC content: 63.69
Gene sequence:
>807_bases ATGAATGATATGAACCCGGGCTTCGTGATGCCGGACGTGCAGTCCAGCCACGATACCCGTCAGATTCCGATTCAGCGCGT GGGCGTGCGCGGCGTGCGTTACCCGATGTCGCTGCAGACGCCGTCGGGCGTGCTGAGCACCGTGGGCACCTTCAACCTGG ATGTGCACCTGCCGGCCGATCAGAAGGGCACGCACATGTCCCGCTTCGTCGCGCTGCTCGAAGAAGAGCGCGAGCCGCTG AACCTGGCGCAATTCCAGCTGTTGCTGGAGAAGATGCTGGAGAAGCTCGAAGCCGACGCCGGCCGCATCGAAGTCAGCTT CCCGTATTTCGTCAGCAAGACCGCGCCGGTGTCGGGCGTGCAGTCGCTGATGGACTACGAGGTGACGATGATCGGCGAAG TGCGCGATGGCCACACCACCGTGCGCGTCAAGGCCCTGGTGCCGGTCACGAGCCTGTGCCCGTGCTCCAAGAAGATCTCG CAGTACGGTGCGCACAACCAGCGCTCGCACATCACCATCGACGCGGAACTGGCGGCCGATACGCCGGTCGAGGCGCTGAT CCGCATGGCCGAGGAAGAAGCCTCGTGCGAACTGTGGGGCCTGCTCAAGCGCCCGGACGAGAAGTTCGTCACCGAACGCG CGTATGAGAACCCGAAGTTCGTCGAAGACCTGGTGCGCGACATCGCCATGCGCCTGAATGAAGACGACCGCATCGTGGCC TACACGCTGGAAGCGGAGAACTTCGAGTCGATCCACAACCACAGCGCCTATGCCTTGATCGAGCGCGACAAGCGCCGCGC CGGCTGA
Upstream 100 bases:
>100_bases ATCACTTGAGGGGTGGTCGCCTTCAATCCGGTTCCGCGGTTTCACACTCGTTGCGCACCGGCCGACTGCGATGGCCGGGC GACCGTAAAGGAAACCGACC
Downstream 100 bases:
>100_bases TCGACGCCGACCCCCGGAAGAAGCCGCCCCATCGAGCGGCTTTTTTCATGCCTGCCGGATGCGGATGTCTTCCAGGTCCC AGCGCGGCGTGACGCCGTAG
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNDMNPGFVMPDVQSSHDTRQIPIQRVGVRGVRYPMSLQTPSGVLSTVGTFNLDVHLPADQKGTHMSRFVALLEEEREPL NLAQFQLLLEKMLEKLEADAGRIEVSFPYFVSKTAPVSGVQSLMDYEVTMIGEVRDGHTTVRVKALVPVTSLCPCSKKIS QYGAHNQRSHITIDAELAADTPVEALIRMAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDIAMRLNEDDRIVA YTLEAENFESIHNHSAYALIERDKRRAG
Sequences:
>Translated_268_residues MNDMNPGFVMPDVQSSHDTRQIPIQRVGVRGVRYPMSLQTPSGVLSTVGTFNLDVHLPADQKGTHMSRFVALLEEEREPL NLAQFQLLLEKMLEKLEADAGRIEVSFPYFVSKTAPVSGVQSLMDYEVTMIGEVRDGHTTVRVKALVPVTSLCPCSKKIS QYGAHNQRSHITIDAELAADTPVEALIRMAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDIAMRLNEDDRIVA YTLEAENFESIHNHSAYALIERDKRRAG >Mature_268_residues MNDMNPGFVMPDVQSSHDTRQIPIQRVGVRGVRYPMSLQTPSGVLSTVGTFNLDVHLPADQKGTHMSRFVALLEEEREPL NLAQFQLLLEKMLEKLEADAGRIEVSFPYFVSKTAPVSGVQSLMDYEVTMIGEVRDGHTTVRVKALVPVTSLCPCSKKIS QYGAHNQRSHITIDAELAADTPVEALIRMAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDIAMRLNEDDRIVA YTLEAENFESIHNHSAYALIERDKRRAG
Specific function: Converts GTP to 7,8-dihydroneopterin triphosphate
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCH4_RALSO (Q8XX96)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520341.1 - ProteinModelPortal: Q8XX96 - SMR: Q8XX96 - GeneID: 1221065 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2220 - NMPDR: fig|267608.1.peg.2220 - HOGENOM: HBG626871 - OMA: SLMDYEV - ProtClustDB: PRK13674 - BioCyc: RSOL267608:RSC2220-MONOMER - HAMAP: MF_01527_B - InterPro: IPR022838 - InterPro: IPR003801 - InterPro: IPR002042 - Gene3D: G3DSA:3.10.270.10 - TIGRFAMs: TIGR00294
Pfam domain/function: PF02649 DUF198
EC number: =3.5.4.16
Molecular weight: Translated: 30201; Mature: 30201
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDMNPGFVMPDVQSSHDTRQIPIQRVGVRGVRYPMSLQTPSGVLSTVGTFNLDVHLPAD CCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCHHHHHCCEEEEEEEECCC QKGTHMSRFVALLEEEREPLNLAQFQLLLEKMLEKLEADAGRIEVSFPYFVSKTAPVSGV CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCHHHH QSLMDYEVTMIGEVRDGHTTVRVKALVPVTSLCPCSKKISQYGAHNQRSHITIDAELAAD HHHHHCCEEEEEEECCCCEEEEEEEECCCHHCCCCHHHHHHHCCCCCCCEEEEEECCCCC TPVEALIRMAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDIAMRLNEDDRIVA CCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEE YTLEAENFESIHNHSAYALIERDKRRAG EEECCCCHHHHHCCCCEEEEECHHCCCC >Mature Secondary Structure MNDMNPGFVMPDVQSSHDTRQIPIQRVGVRGVRYPMSLQTPSGVLSTVGTFNLDVHLPAD CCCCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCHHHHHCCEEEEEEEECCC QKGTHMSRFVALLEEEREPLNLAQFQLLLEKMLEKLEADAGRIEVSFPYFVSKTAPVSGV CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCHHHH QSLMDYEVTMIGEVRDGHTTVRVKALVPVTSLCPCSKKISQYGAHNQRSHITIDAELAAD HHHHHCCEEEEEEECCCCEEEEEEEECCCHHCCCCHHHHHHHCCCCCCCEEEEEECCCCC TPVEALIRMAEEEASCELWGLLKRPDEKFVTERAYENPKFVEDLVRDIAMRLNEDDRIVA CCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEE YTLEAENFESIHNHSAYALIERDKRRAG EEECCCCHHHHHCCCCEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852