Click here to switch to the map view.

The map label for this gene is ytnP [H]

Identifier: 17546933

GI number: 17546933

Start: 2398380

End: 2399399

Strand: Reverse

Name: ytnP [H]

Synonym: RSc2214

Alternate gene names: 17546933

Gene position: 2399399-2398380 (Counterclockwise)

Preceding gene: 17546934

Following gene: 17546932

Centisome position: 64.56

GC content: 68.92

Gene sequence:

>1020_bases
ATGCGACTGTTCCCCACGCTTTCCATGCCCGCCCGGACGGCACGCGCCGCTGCCCTGGCGGCTACCTTGCTGGCTACCGC
CGGTGCCGTCGAGGCACAGACCACGGCGGCGGCGCCCGCCACGCAGCAGCGTGCGCAGGTGCCGGGCTACTACCGCATGG
CGCTGGGTGACGATGTCGTGACCGCGCTGTATGACGGCTATGTCGACCTGCCCGCGAAGACGCTGCTGGGCTTGAGCGCG
CAGTCGATCCAGGGCTTGCTCGCGCGGATGTTCGTGTCGTCCACGCCGGGCATGCAGACGGCGGTGAACGGCTATCTGAT
CGATGCCGGCAGCCAGCGGATCCTGGTCGACACCGGCTCCGGCACCTGCTTCGGCCCGACCATGGGTGGCCTGTTGGGCA
ATGTGCGCGCGGCGGGCTATCAGCCCGAGCAGATCGACGTGGTGCTGCTGACCCACCTGCATCCCGATCACGCCTGCGGG
CTGCTGACGCCGCAGGGCCAGTCGGCGTACCCCAACGCGCAAGTCTACGTGGCCGCGCCGGAGGCAGACTTCTGGCTGAG
CGAAGTCGTCGCGGCATCCAGGCCGAAGGACATGCAGCCCTTCTTCAAGATGGCGCGTGATGCCGTGGCGCCGTATGCCG
CGGCCGGCAGGCTCAAACCGTTCAAGCCCGGCGACGAAGTGCTGCCGGGCGTGCGCTCGGTCACCGCCAACGGCCATACG
CCGGGGCATAGCGGTTACCTGTTCGCTTCCAAGGGGCGCAGCCTGCTGGTGTGGGGCGACATCGTGCACAGCCATGCGGT
GCAGTTCCAGCATCCGGAAGTCGCCATGGAGTTCGACGTCGATCCGAAGCAGGCCGTTGCCACGCGCCGCAGGCTGTTCG
TGGAGGCCGCGCACGACAAGCTGTGGGTGGGCGGCGCGCACCTGCCGTTCCCCGGTCTGGGGCATGTGCGCAAGGACGGC
AAGGCCTATGCGTGGGTGCCGATCGAGTACGGGCCGCTGCGCACCGATCGCCAGGACTGA

Upstream 100 bases:

>100_bases
CCGTCGCGAATGGTGTCAGCGCATGTGCGCGGTGCGTGGCATGATCCGGGCTTCCGCCGCTGCGATACGCGTGCGGCGCA
TCTCCCGAGGAGCCAAGACC

Downstream 100 bases:

>100_bases
GGCCGCCGCGCGCCGGCCGGCTGTTTCATTGCATCGGGCGGCCGGCCGGCGGCCACCCCACGCAAAGATGCGCACGCGCC
ACGGCGTGTTTGCGGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRLFPTLSMPARTARAAALAATLLATAGAVEAQTTAAAPATQQRAQVPGYYRMALGDDVVTALYDGYVDLPAKTLLGLSA
QSIQGLLARMFVSSTPGMQTAVNGYLIDAGSQRILVDTGSGTCFGPTMGGLLGNVRAAGYQPEQIDVVLLTHLHPDHACG
LLTPQGQSAYPNAQVYVAAPEADFWLSEVVAASRPKDMQPFFKMARDAVAPYAAAGRLKPFKPGDEVLPGVRSVTANGHT
PGHSGYLFASKGRSLLVWGDIVHSHAVQFQHPEVAMEFDVDPKQAVATRRRLFVEAAHDKLWVGGAHLPFPGLGHVRKDG
KAYAWVPIEYGPLRTDRQD

Sequences:

>Translated_339_residues
MRLFPTLSMPARTARAAALAATLLATAGAVEAQTTAAAPATQQRAQVPGYYRMALGDDVVTALYDGYVDLPAKTLLGLSA
QSIQGLLARMFVSSTPGMQTAVNGYLIDAGSQRILVDTGSGTCFGPTMGGLLGNVRAAGYQPEQIDVVLLTHLHPDHACG
LLTPQGQSAYPNAQVYVAAPEADFWLSEVVAASRPKDMQPFFKMARDAVAPYAAAGRLKPFKPGDEVLPGVRSVTANGHT
PGHSGYLFASKGRSLLVWGDIVHSHAVQFQHPEVAMEFDVDPKQAVATRRRLFVEAAHDKLWVGGAHLPFPGLGHVRKDG
KAYAWVPIEYGPLRTDRQD
>Mature_339_residues
MRLFPTLSMPARTARAAALAATLLATAGAVEAQTTAAAPATQQRAQVPGYYRMALGDDVVTALYDGYVDLPAKTLLGLSA
QSIQGLLARMFVSSTPGMQTAVNGYLIDAGSQRILVDTGSGTCFGPTMGGLLGNVRAAGYQPEQIDVVLLTHLHPDHACG
LLTPQGQSAYPNAQVYVAAPEADFWLSEVVAASRPKDMQPFFKMARDAVAPYAAAGRLKPFKPGDEVLPGVRSVTANGHT
PGHSGYLFASKGRSLLVWGDIVHSHAVQFQHPEVAMEFDVDPKQAVATRRRLFVEAAHDKLWVGGAHLPFPGLGHVRKDG
KAYAWVPIEYGPLRTDRQD

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 36168; Mature: 36168

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFPTLSMPARTARAAALAATLLATAGAVEAQTTAAAPATQQRAQVPGYYRMALGDDVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEHHCCHHH
TALYDGYVDLPAKTLLGLSAQSIQGLLARMFVSSTPGMQTAVNGYLIDAGSQRILVDTGS
HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCEEEEECCC
GTCFGPTMGGLLGNVRAAGYQPEQIDVVLLTHLHPDHACGLLTPQGQSAYPNAQVYVAAP
CCEECCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEECC
EADFWLSEVVAASRPKDMQPFFKMARDAVAPYAAAGRLKPFKPGDEVLPGVRSVTANGHT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHCCCHHEEECCCCC
PGHSGYLFASKGRSLLVWGDIVHSHAVQFQHPEVAMEFDVDPKQAVATRRRLFVEAAHDK
CCCCCEEEECCCCEEEEEHHHHHHHCEEECCCCEEEEECCCHHHHHHHHHHHHEEECCCE
LWVGGAHLPFPGLGHVRKDGKAYAWVPIEYGPLRTDRQD
EEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MRLFPTLSMPARTARAAALAATLLATAGAVEAQTTAAAPATQQRAQVPGYYRMALGDDVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEHHCCHHH
TALYDGYVDLPAKTLLGLSAQSIQGLLARMFVSSTPGMQTAVNGYLIDAGSQRILVDTGS
HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHCCCEEEEECCCCEEEEECCC
GTCFGPTMGGLLGNVRAAGYQPEQIDVVLLTHLHPDHACGLLTPQGQSAYPNAQVYVAAP
CCEECCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEECC
EADFWLSEVVAASRPKDMQPFFKMARDAVAPYAAAGRLKPFKPGDEVLPGVRSVTANGHT
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCHHHCCCHHEEECCCCC
PGHSGYLFASKGRSLLVWGDIVHSHAVQFQHPEVAMEFDVDPKQAVATRRRLFVEAAHDK
CCCCCEEEECCCCEEEEEHHHHHHHCEEECCCCEEEEECCCHHHHHHHHHHHHEEECCCE
LWVGGAHLPFPGLGHVRKDGKAYAWVPIEYGPLRTDRQD
EEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]