| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is fbp [H]
Identifier: 17546845
GI number: 17546845
Start: 2305211
End: 2306227
Strand: Direct
Name: fbp [H]
Synonym: RSc2126
Alternate gene names: 17546845
Gene position: 2305211-2306227 (Clockwise)
Preceding gene: 17546844
Following gene: 17546853
Centisome position: 62.03
GC content: 65.78
Gene sequence:
>1017_bases ATGAAGCGCATCAACCTCACCCGCTACCTGATCGAAGAGCAGCGCGAGCACAACACCATCCCCGCCGAGCTGCGCCTGCT GCTCGAAGTCGTGGCGCGCGCCTGCAAGGCGATCTCGCACAGCGTCAACAAGGGCGCGCTGGCCGGCGTGCTCGGCTCGG CCGGCACAGGCAACGTGCAAGGCGAAACCCAGCAGAAGCTGGACGTGATCGCCAACGAAGTCCTGCTCGAAGCCAACGAG TACGGCGGCAACCTGGCCGCGATGGCCTCGGAAGAGATGGAGTCGTTCTACGAGATCCCCCATCGCTATCCGAAGGGCGA ATACCTGCTGCTGTTCGATCCGCTCGACGGCTCGTCCAACATCGACGTGAACGTGTCGATCGGCACCATCTTCTCGGTGC TGCACATGCCCAAGCCGGGCCAGACCGTGACCGAAGCCGACTTCATGCAGCCGGGCGTCAGGCAGGTCGCCGCCGGCTAC GCCGTCTACGGTCCGCAGACCACGCTGGTGCTCACCGTCGGCAACGGCGTGCACATGTTCACGCTCGACCGCGAAGTCGG CAGCTTCATCCTGACCAACCGCGACGTGAAGATTCCGGCCGACACCAAGGAGTTCGCCATCAACATGTCGAACATGCGCC ACTGGGCCCCGCCCGTGCGCCGCTACATCGACGAATGCCTGGCCGGCACCGAAGGCCCGCGCGGCAAGGACTTCAACATG CGCTGGATCGCCTCGATGGTGGCCGACGTGCACCGCATCCTCACGCGCGGCGGCATCTTCATGTACCCGTGGGACAAGCG CGAGCCGGGCAAGGCCGGCAAGCTGCGCCTGATGTACGAAGCCAACCCGATGGCCTTCCTGGTGGAGCAGGCCGGCGGCG CCGCCACCAACGGCCATCAGCGCATCCTCGAGATCCAGCCGGAGAAGCTGCACCAGCGCGTGGCGGTGATCCTGGGCTCC AAGAACGAGGTGGACCGCGTCACGCAGTACCACCGGGAAGCCCAGCAGACCGCCTGA
Upstream 100 bases:
>100_bases CCGAGCCTGTCGCGCGACGTGCGCGAGATCGTCGGCAAGGCGCTGGCGTGACGACGCTCACACGGTCTGTCGTAAAATCG CGCCCGTCCCAGGAGAACCC
Downstream 100 bases:
>100_bases GACGGCCCTTGAACCGGTTGTTTCCGTGGTTCTTGCAGAGCGCCAAAAAGTTCTGCTAGAATCGCGGTTTCCGATGCCGG TGTAGCTCAGTTGGTAGAGC
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKRINLTRYLIEEQREHNTIPAELRLLLEVVARACKAISHSVNKGALAGVLGSAGTGNVQGETQQKLDVIANEVLLEANE YGGNLAAMASEEMESFYEIPHRYPKGEYLLLFDPLDGSSNIDVNVSIGTIFSVLHMPKPGQTVTEADFMQPGVRQVAAGY AVYGPQTTLVLTVGNGVHMFTLDREVGSFILTNRDVKIPADTKEFAINMSNMRHWAPPVRRYIDECLAGTEGPRGKDFNM RWIASMVADVHRILTRGGIFMYPWDKREPGKAGKLRLMYEANPMAFLVEQAGGAATNGHQRILEIQPEKLHQRVAVILGS KNEVDRVTQYHREAQQTA
Sequences:
>Translated_338_residues MKRINLTRYLIEEQREHNTIPAELRLLLEVVARACKAISHSVNKGALAGVLGSAGTGNVQGETQQKLDVIANEVLLEANE YGGNLAAMASEEMESFYEIPHRYPKGEYLLLFDPLDGSSNIDVNVSIGTIFSVLHMPKPGQTVTEADFMQPGVRQVAAGY AVYGPQTTLVLTVGNGVHMFTLDREVGSFILTNRDVKIPADTKEFAINMSNMRHWAPPVRRYIDECLAGTEGPRGKDFNM RWIASMVADVHRILTRGGIFMYPWDKREPGKAGKLRLMYEANPMAFLVEQAGGAATNGHQRILEIQPEKLHQRVAVILGS KNEVDRVTQYHREAQQTA >Mature_338_residues MKRINLTRYLIEEQREHNTIPAELRLLLEVVARACKAISHSVNKGALAGVLGSAGTGNVQGETQQKLDVIANEVLLEANE YGGNLAAMASEEMESFYEIPHRYPKGEYLLLFDPLDGSSNIDVNVSIGTIFSVLHMPKPGQTVTEADFMQPGVRQVAAGY AVYGPQTTLVLTVGNGVHMFTLDREVGSFILTNRDVKIPADTKEFAINMSNMRHWAPPVRRYIDECLAGTEGPRGKDFNM RWIASMVADVHRILTRGGIFMYPWDKREPGKAGKLRLMYEANPMAFLVEQAGGAATNGHQRILEIQPEKLHQRVAVILGS KNEVDRVTQYHREAQQTA
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=335, Percent_Identity=42.089552238806, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI16579888, Length=335, Percent_Identity=42.089552238806, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI22907028, Length=321, Percent_Identity=41.1214953271028, Blast_Score=231, Evalue=5e-61, Organism=Escherichia coli, GI1790679, Length=332, Percent_Identity=45.4819277108434, Blast_Score=276, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17508131, Length=327, Percent_Identity=43.4250764525994, Blast_Score=264, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6323409, Length=333, Percent_Identity=39.9399399399399, Blast_Score=256, Evalue=3e-69, Organism=Drosophila melanogaster, GI45550998, Length=329, Percent_Identity=42.5531914893617, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI19921562, Length=329, Percent_Identity=42.5531914893617, Blast_Score=252, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37545; Mature: 37545
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRINLTRYLIEEQREHNTIPAELRLLLEVVARACKAISHSVNKGALAGVLGSAGTGNVQ CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC GETQQKLDVIANEVLLEANEYGGNLAAMASEEMESFYEIPHRYPKGEYLLLFDPLDGSSN CCHHHHHHHHHHHHHEECHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC IDVNVSIGTIFSVLHMPKPGQTVTEADFMQPGVRQVAAGYAVYGPQTTLVLTVGNGVHMF EEEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHCCEEEECCCEEEEEEECCCEEEE TLDREVGSFILTNRDVKIPADTKEFAINMSNMRHWAPPVRRYIDECLAGTEGPRGKDFNM EECHHHCCEEEECCCEECCCCCHHHEEEHHHCHHCCCHHHHHHHHHHCCCCCCCCCCCCH RWIASMVADVHRILTRGGIFMYPWDKREPGKAGKLRLMYEANPMAFLVEQAGGAATNGHQ HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC RILEIQPEKLHQRVAVILGSKNEVDRVTQYHREAQQTA EEEEECHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRINLTRYLIEEQREHNTIPAELRLLLEVVARACKAISHSVNKGALAGVLGSAGTGNVQ CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCC GETQQKLDVIANEVLLEANEYGGNLAAMASEEMESFYEIPHRYPKGEYLLLFDPLDGSSN CCHHHHHHHHHHHHHEECHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC IDVNVSIGTIFSVLHMPKPGQTVTEADFMQPGVRQVAAGYAVYGPQTTLVLTVGNGVHMF EEEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHCCEEEECCCEEEEEEECCCEEEE TLDREVGSFILTNRDVKIPADTKEFAINMSNMRHWAPPVRRYIDECLAGTEGPRGKDFNM EECHHHCCEEEECCCEECCCCCHHHEEEHHHCHHCCCHHHHHHHHHHCCCCCCCCCCCCH RWIASMVADVHRILTRGGIFMYPWDKREPGKAGKLRLMYEANPMAFLVEQAGGAATNGHQ HHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC RILEIQPEKLHQRVAVILGSKNEVDRVTQYHREAQQTA EEEEECHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA