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The map label for this gene is 17546841

Identifier: 17546841

GI number: 17546841

Start: 2298597

End: 2298911

Strand: Direct

Name: 17546841

Synonym: RSc2122

Alternate gene names: NA

Gene position: 2298597-2298911 (Clockwise)

Preceding gene: 17546840

Following gene: 17546844

Centisome position: 61.85

GC content: 66.35

Gene sequence:

>315_bases
GATTTCAGGCTAGCCATCAAAAGCGGAACGCCGCGGGCGCGGCACCACATCAAGAACACCATCTCGACGGGCGACACGAA
GGCCAACGGCGGCCAGCTGGGCGTGTCGGTGCCGCTGGGCGCGGGCAGCATCCTGGCGTCGTACGCGTACACCAAGACCT
CGGGCGCGGCCGACGTCAAGCGCAACACCTGGGCGATCGGCTACGACTACGCGCTGTCCAAGCGCACCGATCTGTATGCG
GCCGACTTCCGCGACAAGGTCACTTCGCTATCGACCGCCGACACCCTGGGCGTGGGCATGCGGGCCAAGTTCTAG

Upstream 100 bases:

>100_bases
TCGACGTGTTCGCCAGGCGCCTCGAGAACGACCGCGCCACCGAGCTGCGCGCGTCGCTGGAGCAGATCCACCGCATCGCC
GGCTTCCGTCTGCACGACCT

Downstream 100 bases:

>100_bases
GCGGTCGGCGGCCGATCCACGGCAAAAGAAAACGGCGCCCGAATCGCTTCAGGCGCCGTTTCGTTTTTCCTGGCCGCCGC
GCAACGCAGCGGCCATGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Porin; OmpC Family Outer Membrane Porin; Porin Transmembrane Protein; Outer Membrane Porin Protein; Outer Membrane Protein-Like; Porin Transmembrane Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
DFRLAIKSGTPRARHHIKNTISTGDTKANGGQLGVSVPLGAGSILASYAYTKTSGAADVKRNTWAIGYDYALSKRTDLYA
ADFRDKVTSLSTADTLGVGMRAKF

Sequences:

>Translated_104_residues
DFRLAIKSGTPRARHHIKNTISTGDTKANGGQLGVSVPLGAGSILASYAYTKTSGAADVKRNTWAIGYDYALSKRTDLYA
ADFRDKVTSLSTADTLGVGMRAKF
>Mature_104_residues
DFRLAIKSGTPRARHHIKNTISTGDTKANGGQLGVSVPLGAGSILASYAYTKTSGAADVKRNTWAIGYDYALSKRTDLYA
ADFRDKVTSLSTADTLGVGMRAKF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11057; Mature: 11057

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
DFRLAIKSGTPRARHHIKNTISTGDTKANGGQLGVSVPLGAGSILASYAYTKTSGAADVK
CEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCC
RNTWAIGYDYALSKRTDLYAADFRDKVTSLSTADTLGVGMRAKF
CCEEEEEECEECCCCCCEEEHHHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA