| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is guaD [H]
Identifier: 17546818
GI number: 17546818
Start: 2273388
End: 2274725
Strand: Direct
Name: guaD [H]
Synonym: RSc2099
Alternate gene names: 17546818
Gene position: 2273388-2274725 (Clockwise)
Preceding gene: 17546817
Following gene: 17546819
Centisome position: 61.17
GC content: 70.4
Gene sequence:
>1338_bases ATGACCACCTTGCCGCCCGCGCCCGACGCCACCCTCCACGCCTACCGCGGCCGCGTGCTGCATTTCCTGCACGACCCGCA GTATCGCGAGCACGATGCCTATCAGTACTGGGAAGACGGGCTGCTGGTCATCGGCGCCGGCAAGGTCGTGCGGGCCGGCG ACCACGCCGCGCTCAAGGGCACCCTGCCCGCCGGCGCGCAGGTGCACGACTACAGCGGCAAGCTGATCGTCCCCGGCTTC ATCGACACGCACATCCACTTCCCGCAGACGGACATCATCGCCTCGCCGTCGCCGGGCCTGCTGCACTGGCTGGAGACCTA CACCTTCCCCGAGGAGCGCCGCTTCGAAAGCCCGCAGTACGCGGCAGGCGTAGCATCGTTCTTCCTCGATGAGCTGCTGC GCAACGGCACCACCAGCGCAATGGTCTGGAGCACCGTGCATCGCGGCTCGGCCGAGACGCTGTTCGAGCAGGCCCGGGCG CGCGGCATGCGCCTGATCACCGGCAAGGTGATGATGGACCGCAACTGCCCCGAATACCTGCGCGACACGGCCGAGCGCGG CGCGCGCGATGCGGCCGACCTGATCGCGCGCTGGCACGGCAAGGACCGGCTCGCCTACGCCATCACGCCGCGCTTCGCGC CGACCTCGAGCGAAGCACAGCTGGCGGCCTGCGGTGAGCTGGCCCGGCAGCATCCGGACGTCTTCATCCAGACCCACGTC GCCGAGAACCCCGACGAAGTGAAATGGGTGGCCGAGCTGTTCCCCAATGCCCGCAGCTACCTGGACGTCTACGACCGCTA CGGCCTGCTGCGCCGCGGCGCCCTCTACGGCCATGCCATCTGGCTGGACGACGGCGACCGCCGGCGCATGGCCGAGTCCG GCGCGGCCGTCGCGCACTGCCCCACCTCCAACCTGTTCCTCGGCAGCGGTCTGTACAACTTCCACGCCAGCGACGCGCAC CGCCTGGCACTGACGCTCGCCACCGACGTGGGCGGCGGCAGCTCGTTCTCGATGCTGCGCACCATGGGCGCCGCGCACGA GGTCGCGCGCATGGGCGGCTACCACCTGAGCGCGCTGCGCCTGTTCTACCTGGCCACGCGCGGCGCCGCCGAGGCGCTTG GCTGGCAGGACCGCATCGGCAGCTTCGTGCCGGGCGCGGAAGCCGACTTCATCGTGCTCGACCCGGCCGCCACGCCGCTG CTGGCGCGCCGCAATTCCCGCGCCGAAACGCTGGAGGCACAGCTGTTCTCGCTGGCGCTGCTGGGCGAAGACCGTGCCGT GGCCGCCACTTACATCCAGGGCGAACCCGCCAAATTCGCGGTTGGCGTATCGGCCTGA
Upstream 100 bases:
>100_bases GCTTCGAGGCGTCGTTCCTGCCCGAGCAGGACAAAGCCCTGTGGCTGAACGCCGTCGATATCCACTGGCGAGCCCATACC TGAACCGCAAGAGACGACAG
Downstream 100 bases:
>100_bases TCCCCTTATAATGCCGGCTTCCATTGGGGAGTAGCCGCCTGGAGCCAATGCTCCGGGGGCCACGTCAACAGACTTGACCG TCGTCGCAATGGCAGACGGT
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTTLPPAPDATLHAYRGRVLHFLHDPQYREHDAYQYWEDGLLVIGAGKVVRAGDHAALKGTLPAGAQVHDYSGKLIVPGF IDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESPQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFEQARA RGMRLITGKVMMDRNCPEYLRDTAERGARDAADLIARWHGKDRLAYAITPRFAPTSSEAQLAACGELARQHPDVFIQTHV AENPDEVKWVAELFPNARSYLDVYDRYGLLRRGALYGHAIWLDDGDRRRMAESGAAVAHCPTSNLFLGSGLYNFHASDAH RLALTLATDVGGGSSFSMLRTMGAAHEVARMGGYHLSALRLFYLATRGAAEALGWQDRIGSFVPGAEADFIVLDPAATPL LARRNSRAETLEAQLFSLALLGEDRAVAATYIQGEPAKFAVGVSA
Sequences:
>Translated_445_residues MTTLPPAPDATLHAYRGRVLHFLHDPQYREHDAYQYWEDGLLVIGAGKVVRAGDHAALKGTLPAGAQVHDYSGKLIVPGF IDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESPQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFEQARA RGMRLITGKVMMDRNCPEYLRDTAERGARDAADLIARWHGKDRLAYAITPRFAPTSSEAQLAACGELARQHPDVFIQTHV AENPDEVKWVAELFPNARSYLDVYDRYGLLRRGALYGHAIWLDDGDRRRMAESGAAVAHCPTSNLFLGSGLYNFHASDAH RLALTLATDVGGGSSFSMLRTMGAAHEVARMGGYHLSALRLFYLATRGAAEALGWQDRIGSFVPGAEADFIVLDPAATPL LARRNSRAETLEAQLFSLALLGEDRAVAATYIQGEPAKFAVGVSA >Mature_444_residues TTLPPAPDATLHAYRGRVLHFLHDPQYREHDAYQYWEDGLLVIGAGKVVRAGDHAALKGTLPAGAQVHDYSGKLIVPGFI DTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESPQYAAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFEQARAR GMRLITGKVMMDRNCPEYLRDTAERGARDAADLIARWHGKDRLAYAITPRFAPTSSEAQLAACGELARQHPDVFIQTHVA ENPDEVKWVAELFPNARSYLDVYDRYGLLRRGALYGHAIWLDDGDRRRMAESGAAVAHCPTSNLFLGSGLYNFHASDAHR LALTLATDVGGGSSFSMLRTMGAAHEVARMGGYHLSALRLFYLATRGAAEALGWQDRIGSFVPGAEADFIVLDPAATPLL ARRNSRAETLEAQLFSLALLGEDRAVAATYIQGEPAKFAVGVSA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=376, Percent_Identity=34.5744680851064, Blast_Score=213, Evalue=2e-55, Organism=Escherichia coli, GI1789249, Length=426, Percent_Identity=46.2441314553991, Blast_Score=414, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319963, Length=354, Percent_Identity=32.4858757062147, Blast_Score=181, Evalue=3e-46, Organism=Drosophila melanogaster, GI24643849, Length=448, Percent_Identity=31.9196428571429, Blast_Score=200, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48802; Mature: 48670
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPPAPDATLHAYRGRVLHFLHDPQYREHDAYQYWEDGLLVIGAGKVVRAGDHAALKG CCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCCEEECCCCCEEEC TLPAGAQVHDYSGKLIVPGFIDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESPQY CCCCCCEEEECCCCEEECCEEECCEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCHH AAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFEQARARGMRLITGKVMMDRNCPEYL HHHHHHHHHHHHHHCCCCHHEEHHHHHCCCHHHHHHHHHHCCEEEEEEEEEECCCCHHHH RDTAERGARDAADLIARWHGKDRLAYAITPRFAPTSSEAQLAACGELARQHPDVFIQTHV HHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AENPDEVKWVAELFPNARSYLDVYDRYGLLRRGALYGHAIWLDDGDRRRMAESGAAVAHC CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCEEEEC PTSNLFLGSGLYNFHASDAHRLALTLATDVGGGSSFSMLRTMGAAHEVARMGGYHLSALR CCCCEEECCCEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LFYLATRGAAEALGWQDRIGSFVPGAEADFIVLDPAATPLLARRNSRAETLEAQLFSLAL HHHHHHCCHHHHCCCHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHEE LGEDRAVAATYIQGEPAKFAVGVSA ECCCCEEEEEEECCCCCEEEEEECC >Mature Secondary Structure TTLPPAPDATLHAYRGRVLHFLHDPQYREHDAYQYWEDGLLVIGAGKVVRAGDHAALKG CCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHCCCEEEEECCCEEECCCCCEEEC TLPAGAQVHDYSGKLIVPGFIDTHIHFPQTDIIASPSPGLLHWLETYTFPEERRFESPQY CCCCCCEEEECCCCEEECCEEECCEECCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCHH AAGVASFFLDELLRNGTTSAMVWSTVHRGSAETLFEQARARGMRLITGKVMMDRNCPEYL HHHHHHHHHHHHHHCCCCHHEEHHHHHCCCHHHHHHHHHHCCEEEEEEEEEECCCCHHHH RDTAERGARDAADLIARWHGKDRLAYAITPRFAPTSSEAQLAACGELARQHPDVFIQTHV HHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC AENPDEVKWVAELFPNARSYLDVYDRYGLLRRGALYGHAIWLDDGDRRRMAESGAAVAHC CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCEEEEC PTSNLFLGSGLYNFHASDAHRLALTLATDVGGGSSFSMLRTMGAAHEVARMGGYHLSALR CCCCEEECCCEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LFYLATRGAAEALGWQDRIGSFVPGAEADFIVLDPAATPLLARRNSRAETLEAQLFSLAL HHHHHHCCHHHHCCCHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHEE LGEDRAVAATYIQGEPAKFAVGVSA ECCCCEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]