| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546812
Identifier: 17546812
GI number: 17546812
Start: 2265322
End: 2266164
Strand: Direct
Name: 17546812
Synonym: RSc2093
Alternate gene names: NA
Gene position: 2265322-2266164 (Clockwise)
Preceding gene: 17546807
Following gene: 17546814
Centisome position: 60.95
GC content: 67.38
Gene sequence:
>843_bases ATGTCCAAACTGTCCGTCATCCTCCGGTTTCCCGCGCGCTTCTGCCTGGCATTGGCCATCGTCGGCGCCGGTGCCGCATA TGCAGGCGAGCTCCGCATGGCCACGACCACCAGCACGGAAAACTCCGGCCTGCTCAAGGTGCTGCTGCCCAAGTTCGAGG CCGCCACCGGGGTGCACGTGCAGGTGATCGCCGTGGGCACCGGCAAGGCGGTCAAGCTGGGCGAAGCCGGCGATGTCGAC GTGGTGCTGGTGCACGCCCGGCAGCTGGAGGACGCCTTCGTCGCGTCCGGCGGCGGCATCGACCGGCGCGACGTGATGTA CAACGACTTCATCCTGGTCGGCCCGAGCGCCGATCCGGCCCACGTGCGCGCGAGCAGCAATGTCATCCAGGGCATGGAGG CCATCGCCGCCGCCGGCGCGAAGTTCGTCTCGCGCGGCGACCATTCCGGCACCGATGTCATGGAGCAGCATTACTGGAAG ACCGCCGGCATCGACCCCAAGGGTAAGCCCTGGTACGTGAGCGCGGGCCTGGGCATGGGCGAAGTCCTGAACATGGCTGC GCAGATAAACGCCTATACGCTGTCGGACCGCGCCACCTACGGCGCCTACCGCGCCCGCACCGGGCTCGACATCGTGCTGG CCGGCGACCCGCGCATGTTCAACCCCTACGGCATCATCGCCGTCAATCCGGCCAGGCACCCCGGCATCAACTACACCGAC GCGACCCGGCTGATCGAGTGGATCACCTCGAGCGCCGGTCAGCGGGCGATCGCCGAGTTCAAGGTGAACGGGGAGCAGGT GTTCTTTCCGAACTACGGGAAGGCGGTTGCCGGCGGCAAGTAG
Upstream 100 bases:
>100_bases GGAACAATCCAACCGTTTCCGGTGGGCGTTCTGGCCGCCGCACGCCGACATCATGCAGCATCCGACATAAAGCGTCCACG TTGCCTGAGACTCCCGCGCC
Downstream 100 bases:
>100_bases GCGTCAGGCGAGCCGTACCGGGGCGCCGCCGGCTCAGGCCGCCGTCTCCAGCTGAGGATGCTGCGGCAGCTCCGCCGCCA CCTCGCCGATCATCCTGCGC
Product: signal peptide protein
Products: NA
Alternate protein names: TUNGstate ABC Transporter Permease; Signal Peptide Protein; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; ABC Type TUNGstate Transporter Permease Component; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSKLSVILRFPARFCLALAIVGAGAAYAGELRMATTTSTENSGLLKVLLPKFEAATGVHVQVIAVGTGKAVKLGEAGDVD VVLVHARQLEDAFVASGGGIDRRDVMYNDFILVGPSADPAHVRASSNVIQGMEAIAAAGAKFVSRGDHSGTDVMEQHYWK TAGIDPKGKPWYVSAGLGMGEVLNMAAQINAYTLSDRATYGAYRARTGLDIVLAGDPRMFNPYGIIAVNPARHPGINYTD ATRLIEWITSSAGQRAIAEFKVNGEQVFFPNYGKAVAGGK
Sequences:
>Translated_280_residues MSKLSVILRFPARFCLALAIVGAGAAYAGELRMATTTSTENSGLLKVLLPKFEAATGVHVQVIAVGTGKAVKLGEAGDVD VVLVHARQLEDAFVASGGGIDRRDVMYNDFILVGPSADPAHVRASSNVIQGMEAIAAAGAKFVSRGDHSGTDVMEQHYWK TAGIDPKGKPWYVSAGLGMGEVLNMAAQINAYTLSDRATYGAYRARTGLDIVLAGDPRMFNPYGIIAVNPARHPGINYTD ATRLIEWITSSAGQRAIAEFKVNGEQVFFPNYGKAVAGGK >Mature_279_residues SKLSVILRFPARFCLALAIVGAGAAYAGELRMATTTSTENSGLLKVLLPKFEAATGVHVQVIAVGTGKAVKLGEAGDVDV VLVHARQLEDAFVASGGGIDRRDVMYNDFILVGPSADPAHVRASSNVIQGMEAIAAAGAKFVSRGDHSGTDVMEQHYWKT AGIDPKGKPWYVSAGLGMGEVLNMAAQINAYTLSDRATYGAYRARTGLDIVLAGDPRMFNPYGIIAVNPARHPGINYTDA TRLIEWITSSAGQRAIAEFKVNGEQVFFPNYGKAVAGGK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29587; Mature: 29456
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSVILRFPARFCLALAIVGAGAAYAGELRMATTTSTENSGLLKVLLPKFEAATGVHV CCCCEEEEHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCCEEEEEECCCCCCCCCEE QVIAVGTGKAVKLGEAGDVDVVLVHARQLEDAFVASGGGIDRRDVMYNDFILVGPSADPA EEEEECCCCEEEECCCCCEEEEEEEEHHCCHHHEECCCCCCCCCEEECCEEEECCCCCCC HVRASSNVIQGMEAIAAAGAKFVSRGDHSGTDVMEQHYWKTAGIDPKGKPWYVSAGLGMG EEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHH EVLNMAAQINAYTLSDRATYGAYRARTGLDIVLAGDPRMFNPYGIIAVNPARHPGINYTD HHHHHHHHEEEEEECCCCCCCHHHHCCCCEEEEECCCCEECCEEEEEECCCCCCCCCHHH ATRLIEWITSSAGQRAIAEFKVNGEQVFFPNYGKAVAGGK HHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCC >Mature Secondary Structure SKLSVILRFPARFCLALAIVGAGAAYAGELRMATTTSTENSGLLKVLLPKFEAATGVHV CCCEEEEHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCCEEEEEECCCCCCCCCEE QVIAVGTGKAVKLGEAGDVDVVLVHARQLEDAFVASGGGIDRRDVMYNDFILVGPSADPA EEEEECCCCEEEECCCCCEEEEEEEEHHCCHHHEECCCCCCCCCEEECCEEEECCCCCCC HVRASSNVIQGMEAIAAAGAKFVSRGDHSGTDVMEQHYWKTAGIDPKGKPWYVSAGLGMG EEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCHH EVLNMAAQINAYTLSDRATYGAYRARTGLDIVLAGDPRMFNPYGIIAVNPARHPGINYTD HHHHHHHHEEEEEECCCCCCCHHHHCCCCEEEEECCCCEECCEEEEEECCCCCCCCCHHH ATRLIEWITSSAGQRAIAEFKVNGEQVFFPNYGKAVAGGK HHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA