Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 17546809

GI number: 17546809

Start: 2261063

End: 2261467

Strand: Reverse

Name: yjbI [H]

Synonym: RSc2090

Alternate gene names: 17546809

Gene position: 2261467-2261063 (Counterclockwise)

Preceding gene: 17546810

Following gene: 17546808

Centisome position: 60.85

GC content: 70.37

Gene sequence:

>405_bases
ATGACTGACGCTGCTTCCGGCCAGGAAACCCTGGCCTTCGACCTGCTCGGCGGCGAGGCGCGCGTGCGCGAACTTGCCGA
CCGCTTCTACGACCTGATGGACCTGGAGCCGGCGTTCGCCGAGCTGCGCGCGCTGCATCCGCCCAGCCTGGACGGCTCGC
GCGACAAGCTGTTCTGGTTCCTGTGCGGCTGGCTGGGCGGCCCCAGCCACTACATCGAGCGCTTCGGCCACCCGCGCCTG
CGCGCGCGCCACCTGCCGTTCGAGATCGGCACCCGGGAGCGCGACCAGTGGATGCGCTGCATGGCCCTGGCGATGCAGGA
CCTCGGCATCGACGACGCCCTGCAGATGCGGCTGATGCAGGCCTTCTGGCAGACCGCCGACTGGATGCGCAACGTGCCGC
GCTGA

Upstream 100 bases:

>100_bases
CTTCGCGGGCGGCTGGCTGGGCCTGCGCGAGGTGCTGCGGCGCCCGGCCATGGCCACGCTGCGCGATGCCTGAACCAACG
ACCGACCGATGTGATGCTGT

Downstream 100 bases:

>100_bases
CCGCGCCGTCCCAACCCATCACGACCACGCCGGAGCCCCGCCATGATCGGCTTGCCCACCGCGGACGATGTCCTCGCCTT
CTGGTTCGGCACCGCGCCGA

Product: oxygen-binding protein (globin)

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTDAASGQETLAFDLLGGEARVRELADRFYDLMDLEPAFAELRALHPPSLDGSRDKLFWFLCGWLGGPSHYIERFGHPRL
RARHLPFEIGTRERDQWMRCMALAMQDLGIDDALQMRLMQAFWQTADWMRNVPR

Sequences:

>Translated_134_residues
MTDAASGQETLAFDLLGGEARVRELADRFYDLMDLEPAFAELRALHPPSLDGSRDKLFWFLCGWLGGPSHYIERFGHPRL
RARHLPFEIGTRERDQWMRCMALAMQDLGIDDALQMRLMQAFWQTADWMRNVPR
>Mature_133_residues
TDAASGQETLAFDLLGGEARVRELADRFYDLMDLEPAFAELRALHPPSLDGSRDKLFWFLCGWLGGPSHYIERFGHPRLR
ARHLPFEIGTRERDQWMRCMALAMQDLGIDDALQMRLMQAFWQTADWMRNVPR

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15598; Mature: 15467

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAASGQETLAFDLLGGEARVRELADRFYDLMDLEPAFAELRALHPPSLDGSRDKLFWF
CCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
LCGWLGGPSHYIERFGHPRLRARHLPFEIGTRERDQWMRCMALAMQDLGIDDALQMRLMQ
HHHHHCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFWQTADWMRNVPR
HHHHHHHHHHCCCC
>Mature Secondary Structure 
TDAASGQETLAFDLLGGEARVRELADRFYDLMDLEPAFAELRALHPPSLDGSRDKLFWF
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
LCGWLGGPSHYIERFGHPRLRARHLPFEIGTRERDQWMRCMALAMQDLGIDDALQMRLMQ
HHHHHCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFWQTADWMRNVPR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]