| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546801
Identifier: 17546801
GI number: 17546801
Start: 2254452
End: 2255471
Strand: Direct
Name: 17546801
Synonym: RSc2082
Alternate gene names: NA
Gene position: 2254452-2255471 (Clockwise)
Preceding gene: 17546800
Following gene: 17546802
Centisome position: 60.66
GC content: 75.69
Gene sequence:
>1020_bases ATGACCCGCGCCAGCCTGCCAGCCGCTCCTGTGCCCTGGGCCTCGGTGACGGCGGCGAATGCGCGCCGGGCGGCCGTCGC CCTGCAATGCGCGGCAACGCTGGGCGTCGCCTACGCGGTGCACCGGTGGGCCGCCCCGGACTGGCGCTGGGCCGCCGCCG CCGCGCTGGGCGCGCTGGCCGGCGGTTACCTGGTCTCGGTCGGCTGGGCCTTCGCCATCGCGCTGACGGGCCTGGGCACG CGCGTGCCGGACGAGCCGGAGTGGTGCCGCATGACCGTGCCGCCGGCGCAGCGCCTCGGCATCGGCGGCGCGCTGTCGTG CTGGCTGCGCGAGTGCGTGTCGGTAGCCTGGATCTTCAATGTGCTGCAGCCGTTTCGCGCTCGGGCCGCCTTCGTGCCCG CCGCGCCGGGCCCGGCTCGTGTGCCGGTGCTGATGCTCCATGGCTACGGCTGCAACCGCGCGGTCTGGCTGCCGATGCAG CGCGCGCTGGCCGCGGCCGGTCATCCCGCCGAGGCGATCGACCTGATGCCGCTGCTGGGCGACATCGACCACTATGCCGG CGCCATCGCCGATGCGGTGACGCGGATGACGCATCGCTACGGCCGCGCGCCGGTGCTGCTCTGCCACAGCATGGGCGGGC TGGCGGCGCGGTCCTTCCTGCGGCAGGCCCGCGGGGCGCCTGCGGTGGCGCGGGTCATCACGCTGGGCACGCCGCATCGC GGCACGGCGATGGCGCGCGCGGGCCGGGGACGCAACGTCAGGCAGATGGCCTGGGCCAATCCGTGGCTGCGCGAGCTGGC CGCCGCCGAGACGCCGGCAACGCGCGAGCGCATCACCTCGATCTTTTCCTGGCACGACTCCATCGTCGGGCCGCCCGGCG CCGCGTGGCTGACGGGCGCGCGGCACGTGCCGCTCTCCGGCATCGGCCATGTGTCGCTGCTGTGCGACGCGCGCTCGCGC GGTGCGGTGCTGGCGGAACTTGCGCGCATCGATCCGCCCGGTCCGGCATCGCCGGCCTGA
Upstream 100 bases:
>100_bases CTGGCCTGGCTCGATCCGCGGCGCCAGTTCCTGCATGATCGGCTGGCCGGCACGCGGCTGATACGCGACTGAGCGCCGCC ACCCGCCAGCGGATTCCGCC
Downstream 100 bases:
>100_bases GACCCGTGCGGGGCGCGGCTCTCGAGCAGACCGCCCGGGCGCCGAACGCCGTGGCGTCATGTGACGGTCATGTTTCCGAC ACGGCTCGTTCACACAGTGG
Product: lipase transmembrane protein
Products: NA
Alternate protein names: Lipase; PGAP1 Family Protein; Secreted Lipase; LIPASE/Acetyltransferase TRANSMEMBRANE PROTEIN; Pgap1 Family Protein; PGAP1-Like Protein
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTRASLPAAPVPWASVTAANARRAAVALQCAATLGVAYAVHRWAAPDWRWAAAAALGALAGGYLVSVGWAFAIALTGLGT RVPDEPEWCRMTVPPAQRLGIGGALSCWLRECVSVAWIFNVLQPFRARAAFVPAAPGPARVPVLMLHGYGCNRAVWLPMQ RALAAAGHPAEAIDLMPLLGDIDHYAGAIADAVTRMTHRYGRAPVLLCHSMGGLAARSFLRQARGAPAVARVITLGTPHR GTAMARAGRGRNVRQMAWANPWLRELAAAETPATRERITSIFSWHDSIVGPPGAAWLTGARHVPLSGIGHVSLLCDARSR GAVLAELARIDPPGPASPA
Sequences:
>Translated_339_residues MTRASLPAAPVPWASVTAANARRAAVALQCAATLGVAYAVHRWAAPDWRWAAAAALGALAGGYLVSVGWAFAIALTGLGT RVPDEPEWCRMTVPPAQRLGIGGALSCWLRECVSVAWIFNVLQPFRARAAFVPAAPGPARVPVLMLHGYGCNRAVWLPMQ RALAAAGHPAEAIDLMPLLGDIDHYAGAIADAVTRMTHRYGRAPVLLCHSMGGLAARSFLRQARGAPAVARVITLGTPHR GTAMARAGRGRNVRQMAWANPWLRELAAAETPATRERITSIFSWHDSIVGPPGAAWLTGARHVPLSGIGHVSLLCDARSR GAVLAELARIDPPGPASPA >Mature_338_residues TRASLPAAPVPWASVTAANARRAAVALQCAATLGVAYAVHRWAAPDWRWAAAAALGALAGGYLVSVGWAFAIALTGLGTR VPDEPEWCRMTVPPAQRLGIGGALSCWLRECVSVAWIFNVLQPFRARAAFVPAAPGPARVPVLMLHGYGCNRAVWLPMQR ALAAAGHPAEAIDLMPLLGDIDHYAGAIADAVTRMTHRYGRAPVLLCHSMGGLAARSFLRQARGAPAVARVITLGTPHRG TAMARAGRGRNVRQMAWANPWLRELAAAETPATRERITSIFSWHDSIVGPPGAAWLTGARHVPLSGIGHVSLLCDARSRG AVLAELARIDPPGPASPA
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35702; Mature: 35571
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRASLPAAPVPWASVTAANARRAAVALQCAATLGVAYAVHRWAAPDWRWAAAAALGALA CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GGYLVSVGWAFAIALTGLGTRVPDEPEWCRMTVPPAQRLGIGGALSCWLRECVSVAWIFN HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHH VLQPFRARAAFVPAAPGPARVPVLMLHGYGCNRAVWLPMQRALAAAGHPAEAIDLMPLLG HHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHH DIDHYAGAIADAVTRMTHRYGRAPVLLCHSMGGLAARSFLRQARGAPAVARVITLGTPHR HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHEECCCCCC GTAMARAGRGRNVRQMAWANPWLRELAAAETPATRERITSIFSWHDSIVGPPGAAWLTGA CHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCC RHVPLSGIGHVSLLCDARSRGAVLAELARIDPPGPASPA CCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRASLPAAPVPWASVTAANARRAAVALQCAATLGVAYAVHRWAAPDWRWAAAAALGALA CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GGYLVSVGWAFAIALTGLGTRVPDEPEWCRMTVPPAQRLGIGGALSCWLRECVSVAWIFN HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHH VLQPFRARAAFVPAAPGPARVPVLMLHGYGCNRAVWLPMQRALAAAGHPAEAIDLMPLLG HHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHH DIDHYAGAIADAVTRMTHRYGRAPVLLCHSMGGLAARSFLRQARGAPAVARVITLGTPHR HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHEECCCCCC GTAMARAGRGRNVRQMAWANPWLRELAAAETPATRERITSIFSWHDSIVGPPGAAWLTGA CHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCC RHVPLSGIGHVSLLCDARSRGAVLAELARIDPPGPASPA CCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA