| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546767
Identifier: 17546767
GI number: 17546767
Start: 2220873
End: 2221181
Strand: Reverse
Name: 17546767
Synonym: RSc2048
Alternate gene names: NA
Gene position: 2221181-2220873 (Counterclockwise)
Preceding gene: 17546768
Following gene: 17546766
Centisome position: 59.77
GC content: 62.78
Gene sequence:
>309_bases ATGGGCACTTCGACAGGCAGCCTGTTTGTCATCGTGCTGGCATTGATCTGTGCCAACCTGCCGTTCGTCAACCAGCGCGT GCTGGCCTTGCTGCCGGCACGCTGGCCGTGCAAGCCGTTCTGGCTGCGCGGCGTCGAGCTGATGGCCATGTATGCCGTGG TCGGCCTGGTCGGCTTCGGCATCGAATCGGGCCAGGGCAATGCCTTTTCGCAAGGCTGGCAGTTCTACGCCATCACCGCC TGCCTGATGCTGGTGTTCGCCTTTCCCGGGTTCACCTGGCAGTATCTGGTGCGCCGCCAACGTCATTGA
Upstream 100 bases:
>100_bases CTGCTGGTGCTGCTGCTGGGCATCTTCCCGGCCAGCCTGATGGGCCTGTGCTACCAGGCGATCCGCCTGACGCTGGCGTC CTGAGTCGGCGGCGAACGGC
Downstream 100 bases:
>100_bases TTTCCAGCCGGGCACGCCAATGGTCCGGCGTTCGAGGTTCCCATGAAACCCGATCCTGCCCGCCTGTCCGCCGATTCCAA TGAGGCCGTGTCCGATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MGTSTGSLFVIVLALICANLPFVNQRVLALLPARWPCKPFWLRGVELMAMYAVVGLVGFGIESGQGNAFSQGWQFYAITA CLMLVFAFPGFTWQYLVRRQRH
Sequences:
>Translated_102_residues MGTSTGSLFVIVLALICANLPFVNQRVLALLPARWPCKPFWLRGVELMAMYAVVGLVGFGIESGQGNAFSQGWQFYAITA CLMLVFAFPGFTWQYLVRRQRH >Mature_101_residues GTSTGSLFVIVLALICANLPFVNQRVLALLPARWPCKPFWLRGVELMAMYAVVGLVGFGIESGQGNAFSQGWQFYAITAC LMLVFAFPGFTWQYLVRRQRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11418; Mature: 11287
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSTGSLFVIVLALICANLPFVNQRVLALLPARWPCKPFWLRGVELMAMYAVVGLVGFG CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC IESGQGNAFSQGWQFYAITACLMLVFAFPGFTWQYLVRRQRH CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure GTSTGSLFVIVLALICANLPFVNQRVLALLPARWPCKPFWLRGVELMAMYAVVGLVGFG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC IESGQGNAFSQGWQFYAITACLMLVFAFPGFTWQYLVRRQRH CCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA