| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is maoC [C]
Identifier: 17546761
GI number: 17546761
Start: 2216085
End: 2216573
Strand: Reverse
Name: maoC [C]
Synonym: RSc2042
Alternate gene names: 17546761
Gene position: 2216573-2216085 (Counterclockwise)
Preceding gene: 17546762
Following gene: 17546760
Centisome position: 59.64
GC content: 69.33
Gene sequence:
>489_bases ATGCGTGTCATCGAATCGCTCGACGCGCTGCGGGGATTGATCGGCCAGGAGGTCGCGGTCAGCGACTGGGTGGAGATCAC GCAGCAGCAGGTCAACCAGTTTGCCGAGGCCACGGGAGACCGCCAGTGGATCCACGTGGATGTGGAGCGCGCCCGGCGCG AGTCGCCGTTCGGCGCGCCGGTGGCGCACGGTTTCCTGACGCTGTCGCTGCTGCCGGCGCTGATGCAGAGCGCGCTCGAC ATGCCCGATGTGAAGATGGGCGTGAACTACGGCCTGAACAAGGTCCGCTTTCCGGCGCCGGTGCCGGTGGGCAGCCGTCT GCGCGCCCGCGTGAGCCTGCTGGAGATGGAGATGCTGCCGCCGCTGCAGCCGTCGCCGGATGCGCCCGCGCTGACCGGCG CGCAGATGACCTGGGGCGTGACGATCGAGTGCGAAGGGCAGGCGCGGCCCGTGTGCGTGGCCGAGTCGATTTCGCGCCGC TATTCCTGA
Upstream 100 bases:
>100_bases CGCGCAACCAGCACGGCGAGCTGGTCTGCACCCTGGTCGGCATGGGTCTGTTCGGCCGCCGCCCGGCCGCCTGAACCGGG TCACGAGGAGACTGCCAACG
Downstream 100 bases:
>100_bases CCTGAGCCCGCGCGGCGATCGCTGCCGCGCCGGAAAGCTGATGTTTCCGTGAGGGGCGTCAGCTTTTTTTCTTGCGTATC GACGGTTCTATGCTTGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRVIESLDALRGLIGQEVAVSDWVEITQQQVNQFAEATGDRQWIHVDVERARRESPFGAPVAHGFLTLSLLPALMQSALD MPDVKMGVNYGLNKVRFPAPVPVGSRLRARVSLLEMEMLPPLQPSPDAPALTGAQMTWGVTIECEGQARPVCVAESISRR YS
Sequences:
>Translated_162_residues MRVIESLDALRGLIGQEVAVSDWVEITQQQVNQFAEATGDRQWIHVDVERARRESPFGAPVAHGFLTLSLLPALMQSALD MPDVKMGVNYGLNKVRFPAPVPVGSRLRARVSLLEMEMLPPLQPSPDAPALTGAQMTWGVTIECEGQARPVCVAESISRR YS >Mature_162_residues MRVIESLDALRGLIGQEVAVSDWVEITQQQVNQFAEATGDRQWIHVDVERARRESPFGAPVAHGFLTLSLLPALMQSALD MPDVKMGVNYGLNKVRFPAPVPVGSRLRARVSLLEMEMLPPLQPSPDAPALTGAQMTWGVTIECEGQARPVCVAESISRR YS
Specific function: May be involved in the hydration of fatty acids for production of polyhydroxylalkanoates [H]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 17794; Mature: 17794
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIESLDALRGLIGQEVAVSDWVEITQQQVNQFAEATGDRQWIHVDVERARRESPFGAP CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCH VAHGFLTLSLLPALMQSALDMPDVKMGVNYGLNKVRFPAPVPVGSRLRARVSLLEMEMLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC PLQPSPDAPALTGAQMTWGVTIECEGQARPVCVAESISRRYS CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure MRVIESLDALRGLIGQEVAVSDWVEITQQQVNQFAEATGDRQWIHVDVERARRESPFGAP CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCH VAHGFLTLSLLPALMQSALDMPDVKMGVNYGLNKVRFPAPVPVGSRLRARVSLLEMEMLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC PLQPSPDAPALTGAQMTWGVTIECEGQARPVCVAESISRRYS CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]