| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ureG
Identifier: 17546748
GI number: 17546748
Start: 2204109
End: 2204741
Strand: Reverse
Name: ureG
Synonym: RSc2029
Alternate gene names: 17546748
Gene position: 2204741-2204109 (Counterclockwise)
Preceding gene: 17546749
Following gene: 17546746
Centisome position: 59.32
GC content: 67.46
Gene sequence:
>633_bases ATGCGTACCAAGAAACTGCCCGCCCTGCGCGTCGGCGTGGGCGGCCCCGTCGGTTCCGGCAAGACCACGCTGCTGGAGAT GCTGTGCAAGGCCATGCGCGAGCGCTATGACCTCGTCGCCATCACCAATGACATCTACACCAAGGAAGACCAGCGCCTGC TGACCCTCTCCGGCGCGCTGCCGGCCGAGCGCATCATGGGCGTGGAGACGGGCGGCTGCCCGCACACCGCCATCCGCGAA GATGCCTCGATCAACCTCGAAGCCGTCGACCGCATGCTCGCGCGGTTTCCGGATGCCGACGTCGTCTTCATCGAATCCGG CGGCGACAACCTGGCGGCCACCTTCAGCCCCGAGCTGTCGGACCTGACGATCTACGTGATCGACGTGGCGGGCGGCGAGA AGATTCCGCGCAAGGGCGGTCCGGGCATCACCAAGTCGGACCTGCTGATCATCAACAAGACCGACCTCGCGCCGTATGTC GGTGCCTCGCTGGACGTGATGGCCAGCGACGCGCGCAAGATGCGCGGCGACCGCCCGTTCGTGATGTGCAACCTGAAGGA GCAGGCCGGGCTGGACGCGGTCGTGCGCTTCATCGAGCAGCAGGGCATGCTGGCGGCGCCCGCCGCGGGCTGA
Upstream 100 bases:
>100_bases GCCATCCGCCCGAACTCTCGACCTTCTCGCCCGGGCTCGGTGTCCTGTCGGCCCGGCACGAGACGCAATACTCACGACTC TTCCGTTCCTGAACCTCATC
Downstream 100 bases:
>100_bases TCCGGGCGGCATCGGCATGCGGCCGCGTGGCCGCGAGCGCTCCGGCCACGGGGTGGGCCGCCGGCCGATCATCGCCGCGC CGTCGCGGACGACGGCGGCG
Product: urease accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MRTKKLPALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGALPAERIMGVETGGCPHTAIRE DASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYV GASLDVMASDARKMRGDRPFVMCNLKEQAGLDAVVRFIEQQGMLAAPAAG
Sequences:
>Translated_210_residues MRTKKLPALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGALPAERIMGVETGGCPHTAIRE DASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYV GASLDVMASDARKMRGDRPFVMCNLKEQAGLDAVVRFIEQQGMLAAPAAG >Mature_210_residues MRTKKLPALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGALPAERIMGVETGGCPHTAIRE DASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYV GASLDVMASDARKMRGDRPFVMCNLKEQAGLDAVVRFIEQQGMLAAPAAG
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREG_RALSO (Q8XXT4)
Other databases:
- EMBL: AL646052 - RefSeq: NP_520150.1 - ProteinModelPortal: Q8XXT4 - SMR: Q8XXT4 - GeneID: 1220869 - GenomeReviews: AL646052_GR - KEGG: rso:RSc2029 - NMPDR: fig|267608.1.peg.2029 - HOGENOM: HBG364734 - OMA: LCKAMRE - ProtClustDB: CLSK2302622 - BioCyc: RSOL267608:RSC2029-MONOMER - GO: GO:0005737 - HAMAP: MF_01389 - InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 - PIRSF: PIRSF005624 - TIGRFAMs: TIGR00101
Pfam domain/function: PF02492 cobW
EC number: NA
Molecular weight: Translated: 22450; Mature: 22450
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKKLPALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGAL CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCC PAERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELS CHHHHEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCC DLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYVGASLDVMASDARKMRGDRPF CEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE VMCNLKEQAGLDAVVRFIEQQGMLAAPAAG EEEECHHHCCHHHHHHHHHHCCCEECCCCC >Mature Secondary Structure MRTKKLPALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGAL CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCC PAERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELS CHHHHEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCC DLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYVGASLDVMASDARKMRGDRPF CEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE VMCNLKEQAGLDAVVRFIEQQGMLAAPAAG EEEECHHHCCHHHHHHHHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852