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The map label for this gene is tonB

Identifier: 17546682

GI number: 17546682

Start: 2142146

End: 2142811

Strand: Direct

Name: tonB

Synonym: RSc1963

Alternate gene names: NA

Gene position: 2142146-2142811 (Clockwise)

Preceding gene: 17546681

Following gene: 17546683

Centisome position: 57.64

GC content: 69.37

Gene sequence:

>666_bases
ATGATTCACCCTCGTACCCTCAAGATCCTCGTCGTGGTGCTGCTGATGCACGTGGGTGTGCTGACGCTGATCCAGCTCGG
CCTGATCGCATCGCCGCTGCGCCAGGAACCACCACCCGAACTGCAGGTGAACATCATCCCGGACACGCCGCCGCAGCCGG
TGCGCCAGCCGGAACCGCCCAAGCCTGAGCCCGCCAAGCCCGCGCCGCCCAAGCAGGTGAACATCGTCAAGCCCGTGCCG
CAACCCAAGCCGGCTCCGACGCCGGCACCGGCCTTGCCGCCCTCCGATACCGCACCCGTGGTGCCGGCCGCACCGCCCGC
GCCTCCCGCCCCGCCGGTGGAGGCCGCACCCGCGCCGGCTCCGGCCCCGGTCCAGTCGGGCCCGATCAACGTCGGCATCA
ACGACATCCAGTGCAGCAACCCGCCGCTCGTCTACCCGACCATGTCGCAGAAGATGGGCGAGGAAGGCCGCACCCTCGTC
AAGATCACCATCGGCCCCGAGGGCGACGTGGTCAACGCGCTGGTGGCCACCACCAGCGGCTCCGCGCGCCTGGACCGCGC
CGCGCTCGAATCGGCCCGCAGCCTCCATTGCTCGCCATACAAGCAGAACGGCCGCGCCATGACCGTGGTGGCCAACAAGC
CGTTCGTCTTCAAGCTCGACAATTAA

Upstream 100 bases:

>100_bases
GTTTCGCTGATCGTCTTCGGCAAGCGCTGAACGCGCGCGCCATGCCCCGGATGCCGGCCAACCGCTCACTCCCGATTCCG
CTTTCGATTTCCCGCCGTTG

Downstream 100 bases:

>100_bases
ACTGAACTTCGTCTTTCGCTAAGTAGGAAACCCATCATGCAGGAACTCGGTCTCTCCCATCTCTGGACACAGGGCGACAT
CGTCGCGCGCGGCACGGCCC

Product: TONB transmembrane protein

Products: NA

Alternate protein names: NB C-Terminal; NB-Like Protein; NB-Like Protein Links Inner And Outer Membranes; Nb Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEPPPELQVNIIPDTPPQPVRQPEPPKPEPAKPAPPKQVNIVKPVP
QPKPAPTPAPALPPSDTAPVVPAAPPAPPAPPVEAAPAPAPAPVQSGPINVGINDIQCSNPPLVYPTMSQKMGEEGRTLV
KITIGPEGDVVNALVATTSGSARLDRAALESARSLHCSPYKQNGRAMTVVANKPFVFKLDN

Sequences:

>Translated_221_residues
MIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEPPPELQVNIIPDTPPQPVRQPEPPKPEPAKPAPPKQVNIVKPVP
QPKPAPTPAPALPPSDTAPVVPAAPPAPPAPPVEAAPAPAPAPVQSGPINVGINDIQCSNPPLVYPTMSQKMGEEGRTLV
KITIGPEGDVVNALVATTSGSARLDRAALESARSLHCSPYKQNGRAMTVVANKPFVFKLDN
>Mature_221_residues
MIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEPPPELQVNIIPDTPPQPVRQPEPPKPEPAKPAPPKQVNIVKPVP
QPKPAPTPAPALPPSDTAPVVPAAPPAPPAPPVEAAPAPAPAPVQSGPINVGINDIQCSNPPLVYPTMSQKMGEEGRTLV
KITIGPEGDVVNALVATTSGSARLDRAALESARSLHCSPYKQNGRAMTVVANKPFVFKLDN

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23165; Mature: 23165

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEPPPELQVNIIPDTPPQPVRQPEPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
KPEPAKPAPPKQVNIVKPVPQPKPAPTPAPALPPSDTAPVVPAAPPAPPAPPVEAAPAPA
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPVQSGPINVGINDIQCSNPPLVYPTMSQKMGEEGRTLVKITIGPEGDVVNALVATTSG
CCCCCCCCEEECCCEEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCC
SARLDRAALESARSLHCSPYKQNGRAMTVVANKPFVFKLDN
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MIHPRTLKILVVVLLMHVGVLTLIQLGLIASPLRQEPPPELQVNIIPDTPPQPVRQPEPP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
KPEPAKPAPPKQVNIVKPVPQPKPAPTPAPALPPSDTAPVVPAAPPAPPAPPVEAAPAPA
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAPVQSGPINVGINDIQCSNPPLVYPTMSQKMGEEGRTLVKITIGPEGDVVNALVATTSG
CCCCCCCCEEECCCEEECCCCCEEECCHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCC
SARLDRAALESARSLHCSPYKQNGRAMTVVANKPFVFKLDN
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA