| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 17546679
GI number: 17546679
Start: 2138836
End: 2139192
Strand: Reverse
Name: arsR [C]
Synonym: RSc1960
Alternate gene names: 17546679
Gene position: 2139192-2138836 (Counterclockwise)
Preceding gene: 17546680
Following gene: 17546678
Centisome position: 57.56
GC content: 67.51
Gene sequence:
>357_bases ATGCTTAACCATGACGCTTCGCTCGATCTGACGTTCCAGGCGCTCGCCGATGCGACCCGGCGATCGATGCTCGCGCAGCT GACCCGGGGCCCTGCCTCGGTGAGCGAGCTCGCACGGCCGCTGGGGATGTCGCTGCCGGCCGTGATGCAGCACCTGGCGG TGCTGGAGCATTCGGGTCTCGTGCGCTCCGAGAAGACCGGCCGCGTGCGGACCTGCCGGATCGAACCGCAGGCGCTGAGC CTGGCGGAGCAATGGATCAACCAGCGGCGCATCGAGTGGGAACACCACTTCGACCGGCTCGGCGCCTACCTGGCAACCCT CGGACAGGAAGGAGCAGCTCATGACGACGGCGAATGA
Upstream 100 bases:
>100_bases CTGCCCGCGCATTCCCACAGGGTGCGCGGGTTTTTCATTGCCGGCGCAATCGGAAGATAAAGGACTTGCTTAACTGTTTT GCCTTCCTAGACTTAAGGAC
Downstream 100 bases:
>100_bases AAACGCGACGGACCTGCAGGCACGGCCGCTGGTGGTCTCCCGGACGTTCCTGGTCCCGCGCGCGTGGGTATTCAAGGCAT GGACATCGGCGGAGCACATC
Product: transcriptional regulatory DNA-binding transcription regulator protein
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; ArsR Family Regulatory; Transcription Regulator ArsR; Transcriptional Regulator Arsr Family; ArsR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein; HTH Family Transcriptional Regulator; Arsenical Resistance Operon Repressor; Transcriptional Regulator Protein ArsR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulatory ArsR Family; MarR Family Transcriptional Regulator; Arsr Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein Asrr; Transcriptional Regulator Arsr Domain Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein ArsR Family; Transcriptional Regulator ArsR-Family; Xin-Antitoxin System Antitoxin Component ArsR Family
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLNHDASLDLTFQALADATRRSMLAQLTRGPASVSELARPLGMSLPAVMQHLAVLEHSGLVRSEKTGRVRTCRIEPQALS LAEQWINQRRIEWEHHFDRLGAYLATLGQEGAAHDDGE
Sequences:
>Translated_118_residues MLNHDASLDLTFQALADATRRSMLAQLTRGPASVSELARPLGMSLPAVMQHLAVLEHSGLVRSEKTGRVRTCRIEPQALS LAEQWINQRRIEWEHHFDRLGAYLATLGQEGAAHDDGE >Mature_118_residues MLNHDASLDLTFQALADATRRSMLAQLTRGPASVSELARPLGMSLPAVMQHLAVLEHSGLVRSEKTGRVRTCRIEPQALS LAEQWINQRRIEWEHHFDRLGAYLATLGQEGAAHDDGE
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13096; Mature: 13096
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNHDASLDLTFQALADATRRSMLAQLTRGPASVSELARPLGMSLPAVMQHLAVLEHSGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC VRSEKTGRVRTCRIEPQALSLAEQWINQRRIEWEHHFDRLGAYLATLGQEGAAHDDGE CCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLNHDASLDLTFQALADATRRSMLAQLTRGPASVSELARPLGMSLPAVMQHLAVLEHSGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC VRSEKTGRVRTCRIEPQALSLAEQWINQRRIEWEHHFDRLGAYLATLGQEGAAHDDGE CCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA