Click here to switch to the map view.

The map label for this gene is yjcG [C]

Identifier: 17546670

GI number: 17546670

Start: 2127208

End: 2129274

Strand: Reverse

Name: yjcG [C]

Synonym: RSc1951

Alternate gene names: 17546670

Gene position: 2129274-2127208 (Counterclockwise)

Preceding gene: 17546671

Following gene: 17546668

Centisome position: 57.29

GC content: 69.67

Gene sequence:

>2067_bases
TTGGCCGCCGCCGCCGCTGCCACGGACAGCCGCTTTCGCAGGCGGCTGTTTGTCTATTACGGGCTGTACACCGCCGGCCT
GCTGCTCTTCATCGTGATGATGGGCGCGATCGAGCGCGTGCGCGGGCCGGGCGTGTGGCTCGGCTATGTGTTCCTGTTCG
TCACCATCGCGATCTATGCCTGCATCGGACTGATCTGCCGCACGGCGGACCTGACCGAGTACTACGTGGCCGGGCGTCGC
GTGCCGGCTTTCTTCAACGGCATGGCCACCGCCGCCGACTGGATGAGCGCGGCCTCGTTCATCGGCCTGGCGGGCATCGT
GTTCGCTTCCGGCTACGAGGGGCTGGCCTACGTGATGGGCTGGACCGGCGGCTACTGCCTGGTCGCGTTCCTGCTGGCGC
CCTACCTGCGCAAGTTCGGCGGCTACACGGTGCCGGACTTCCTCGCCACGCGCTACGGCAACGGCGAGCGGGGCGGCAGC
GCGGTCGTGCGCGGCATCGCCGTGCTGGGCGCGACGCTGTGTTCGTTCGTCTACCTCGTCGCGCAGATCCAGGGGGTGGG
GCTGGTGGTCACGCGCTTCATCGGGGTGGAGTTCTCGGTGGGGGTGTTCTTCGGGCTGGCGGGCATCCTGGTGTGTTCGT
TCCTGGGCGGCATGCGCGCGGTGACGTGGACGCAGGTGGCGCAGTACATCATCCTGATCGTGTCGTTCCTGGGCGTGGTG
GCGATGATCGGCTGGCACCGGCATCACGACCCGGTGCCGCAGCTCTCCACCGGCCGGCTGCTGCTGCAGATCGAGGCGGC
GGAGCGCCGCATCGCGCAGGATCCCGCCGAGCAGGCCGTGCGCGAGCGCTTCCTGGCCGACGCGCAGGCGCTGCAGGAGC
GCATCGCGCGGCTGCCGCAATCCTTCGACGAGACGCGTGAAGCGCTGAACGCGCAGCTCAAGCGCGCGCGCGAACACAAC
GCGCCGCTGCGCGAGATCAAGGCGCTCGAGCGCGCGCGCGAGGCCTTCCCGCCCGATGCGGCCGCCGCCGGCATCCTGTG
GAACCAGCAGCGCGAGGAGGCGCTGGCGCACAGCCGCGTGGCGCCGCCCTCGACCGAGCCGTTCCCGTCCGCCTCCGAAG
CCGAGCGCGGCCGGCAGCGGCTGAATTTCGTGCTGCTGGTGTTCTGTCTGATGGTCGGCACGGCCAGCCTGCCGCACATC
CTGACGCGCTTCCATACCACGCCGTCGGTGCGCGAGACGCGCAACTCGGTCGGCTGGACGCTGTTCTTCATCGTGCTGCT
GTACGTGTCGGCGCCGGCGCTGGCGGCGCTGGTGAAGCTGGACCTGCTGCAGCACCTGGTGGGCACCTCGTTCGCCGACC
TGCCGCAGTGGATCGTGCCGTGGCGCAAGGTGGACCCGCCGGTGTTCGCGCTGCACGACATCAATGGCGACGGCATCGTG
CAATGGGCCGAGGTGATGATCCAGCCCGACATGATCGTGCTGGCCGCGCCCGAGATCGCCGGGCTGCCGTACGTGATGTC
GGGGCTAATCGCGGCGGGCGCGCTGGCCGCCGCGCTGTCGACCGCCGATGGGCTGTTGCTGACCATTGCCAACGCGCTGT
CGCACGATGTGTATTTCCACATGATCGACAACAACGCCAGCCACCAGCGCCGCGTGACCGGCGCCAAGGTGGTGCTGCTG
GGCGTGGCGCTGCTGGCGGCCTACGTGACCTCGCTCAAGCCGGGCAACATCCTGTTCCTGGTGGGCGCCGCGTTCTCGCT
GGCGGCGTCGTGCTTCTTCCCGGTGCTGGTGCTGGGCGTGTTCTGGAAGCGCACCAACCGGGCCGGCGCCATCGCGGGCA
TGCTGACCGGGCTGGCGGTCAGCGTGTACTACATCTTCGTCAACTACCCGTTCTTCACGCGGATGACGGGCATCCTGGGG
CGGCCGTGGTTCGGCGTCGACCCGATCGCCTCGGGGGCGTTCGGCGTGCCGGCCGGGTTTGCCGCCGCCGTGATCGTCAG
CCTGCTGACCCGGCCGAACCGGCCGGTGGTGGACCGGCTGGTCGGCTATCTGCGCGATCCGCTGTAG

Upstream 100 bases:

>100_bases
CAAGGGCGAGGACATCACGCAGGACACCTCCACGCTGGAGAACCCGGCCATCCTGGAGCAGCTCAAGGAAGCCCGCTGAT
CCGGCACCGGCCTGTCTGCC

Downstream 100 bases:

>100_bases
CGCGTCGCCAGCGTCGAGCTGTCGTGGATGCGCTCGACCGACGAGGCGATCAGCCTCTTGATCTCCTTGGCCGCCTTGGC
AGAGCGCTGCGCGAGGCTGC

Product: solute:Na+ symporter permease transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MAAAAAATDSRFRRRLFVYYGLYTAGLLLFIVMMGAIERVRGPGVWLGYVFLFVTIAIYACIGLICRTADLTEYYVAGRR
VPAFFNGMATAADWMSAASFIGLAGIVFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKFGGYTVPDFLATRYGNGERGGS
AVVRGIAVLGATLCSFVYLVAQIQGVGLVVTRFIGVEFSVGVFFGLAGILVCSFLGGMRAVTWTQVAQYIILIVSFLGVV
AMIGWHRHHDPVPQLSTGRLLLQIEAAERRIAQDPAEQAVRERFLADAQALQERIARLPQSFDETREALNAQLKRAREHN
APLREIKALERAREAFPPDAAAAGILWNQQREEALAHSRVAPPSTEPFPSASEAERGRQRLNFVLLVFCLMVGTASLPHI
LTRFHTTPSVRETRNSVGWTLFFIVLLYVSAPALAALVKLDLLQHLVGTSFADLPQWIVPWRKVDPPVFALHDINGDGIV
QWAEVMIQPDMIVLAAPEIAGLPYVMSGLIAAGALAAALSTADGLLLTIANALSHDVYFHMIDNNASHQRRVTGAKVVLL
GVALLAAYVTSLKPGNILFLVGAAFSLAASCFFPVLVLGVFWKRTNRAGAIAGMLTGLAVSVYYIFVNYPFFTRMTGILG
RPWFGVDPIASGAFGVPAGFAAAVIVSLLTRPNRPVVDRLVGYLRDPL

Sequences:

>Translated_688_residues
MAAAAAATDSRFRRRLFVYYGLYTAGLLLFIVMMGAIERVRGPGVWLGYVFLFVTIAIYACIGLICRTADLTEYYVAGRR
VPAFFNGMATAADWMSAASFIGLAGIVFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKFGGYTVPDFLATRYGNGERGGS
AVVRGIAVLGATLCSFVYLVAQIQGVGLVVTRFIGVEFSVGVFFGLAGILVCSFLGGMRAVTWTQVAQYIILIVSFLGVV
AMIGWHRHHDPVPQLSTGRLLLQIEAAERRIAQDPAEQAVRERFLADAQALQERIARLPQSFDETREALNAQLKRAREHN
APLREIKALERAREAFPPDAAAAGILWNQQREEALAHSRVAPPSTEPFPSASEAERGRQRLNFVLLVFCLMVGTASLPHI
LTRFHTTPSVRETRNSVGWTLFFIVLLYVSAPALAALVKLDLLQHLVGTSFADLPQWIVPWRKVDPPVFALHDINGDGIV
QWAEVMIQPDMIVLAAPEIAGLPYVMSGLIAAGALAAALSTADGLLLTIANALSHDVYFHMIDNNASHQRRVTGAKVVLL
GVALLAAYVTSLKPGNILFLVGAAFSLAASCFFPVLVLGVFWKRTNRAGAIAGMLTGLAVSVYYIFVNYPFFTRMTGILG
RPWFGVDPIASGAFGVPAGFAAAVIVSLLTRPNRPVVDRLVGYLRDPL
>Mature_687_residues
AAAAAATDSRFRRRLFVYYGLYTAGLLLFIVMMGAIERVRGPGVWLGYVFLFVTIAIYACIGLICRTADLTEYYVAGRRV
PAFFNGMATAADWMSAASFIGLAGIVFASGYEGLAYVMGWTGGYCLVAFLLAPYLRKFGGYTVPDFLATRYGNGERGGSA
VVRGIAVLGATLCSFVYLVAQIQGVGLVVTRFIGVEFSVGVFFGLAGILVCSFLGGMRAVTWTQVAQYIILIVSFLGVVA
MIGWHRHHDPVPQLSTGRLLLQIEAAERRIAQDPAEQAVRERFLADAQALQERIARLPQSFDETREALNAQLKRAREHNA
PLREIKALERAREAFPPDAAAAGILWNQQREEALAHSRVAPPSTEPFPSASEAERGRQRLNFVLLVFCLMVGTASLPHIL
TRFHTTPSVRETRNSVGWTLFFIVLLYVSAPALAALVKLDLLQHLVGTSFADLPQWIVPWRKVDPPVFALHDINGDGIVQ
WAEVMIQPDMIVLAAPEIAGLPYVMSGLIAAGALAAALSTADGLLLTIANALSHDVYFHMIDNNASHQRRVTGAKVVLLG
VALLAAYVTSLKPGNILFLVGAAFSLAASCFFPVLVLGVFWKRTNRAGAIAGMLTGLAVSVYYIFVNYPFFTRMTGILGR
PWFGVDPIASGAFGVPAGFAAAVIVSLLTRPNRPVVDRLVGYLRDPL

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=214, Percent_Identity=33.1775700934579, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 74609; Mature: 74478

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00018 EF_HAND_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
AAAAAATDSRFRRRLFVYYGLYTAGLLLFIVMMGAIERVRGPGVWLGYVFLFVTIAIYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
CIGLICRTADLTEYYVAGRRVPAFFNGMATAADWMSAASFIGLAGIVFASGYEGLAYVMG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC
WTGGYCLVAFLLAPYLRKFGGYTVPDFLATRYGNGERGGSAVVRGIAVLGATLCSFVYLV
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQIQGVGLVVTRFIGVEFSVGVFFGLAGILVCSFLGGMRAVTWTQVAQYIILIVSFLGVV
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AMIGWHRHHDPVPQLSTGRLLLQIEAAERRIAQDPAEQAVRERFLADAQALQERIARLPQ
HHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SFDETREALNAQLKRAREHNAPLREIKALERAREAFPPDAAAAGILWNQQREEALAHSRV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
APPSTEPFPSASEAERGRQRLNFVLLVFCLMVGTASLPHILTRFHTTPSVRETRNSVGWT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LFFIVLLYVSAPALAALVKLDLLQHLVGTSFADLPQWIVPWRKVDPPVFALHDINGDGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCCEEEEEECCCCCHH
QWAEVMIQPDMIVLAAPEIAGLPYVMSGLIAAGALAAALSTADGLLLTIANALSHDVYFH
HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEE
MIDNNASHQRRVTGAKVVLLGVALLAAYVTSLKPGNILFLVGAAFSLAASCFFPVLVLGV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
FWKRTNRAGAIAGMLTGLAVSVYYIFVNYPFFTRMTGILGRPWFGVDPIASGAFGVPAGF
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
AAAVIVSLLTRPNRPVVDRLVGYLRDPL
HHHHHHHHHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]