| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546654
Identifier: 17546654
GI number: 17546654
Start: 2109365
End: 2109844
Strand: Reverse
Name: 17546654
Synonym: RSc1935
Alternate gene names: NA
Gene position: 2109844-2109365 (Counterclockwise)
Preceding gene: 17546655
Following gene: 17546653
Centisome position: 56.77
GC content: 71.04
Gene sequence:
>480_bases ATGTCCTCATTCATCGCAGCAGCACCCGTACCGACGCCGGCGCAACCCGGCGGGCAGCCGATCGGCAACGACGGCTTTTT CCCGGACATCGACGTCGACCAGGCCTGCGCCGCCATGCGCCTGGACGGCACCGTCACGCCCGAACGCCTGCGCGCCGCGC TGGTCGACGCCGCGCTGTCCGTCAACGATGAACTGGCGGCATGGAAGGCGCAGCAGCTTGCCGCCGGATTCACGGAGCTG GGCGCAGTGCCGGGGCAGTGGATCGACGGCCGGAGCCGCCACGTGCACCGCTACCTGCGCGCGGTCCACTGCACGGCGGC GGCCTGGCTGATGGAGCGGTACCGGTCGTTCGACGCCACCGCCGCGGGGGACCGCAAGGCCGAGGCGGAAAACACCTCGG TGGATGATCTGCGCCGCGATGCGCGCTGGGCAGTCAGCGACATCACCGGCGCAGCGCGCACCACCGTGGAGCTGATCTGA
Upstream 100 bases:
>100_bases CTGATACCGAGCGTGACCCCGCGCATCAGGCGGCACGGGGCGACCTTCCGGCGTGCCGCGAATCGTCGCCCCGTCCACCG CCTCCCAGCTCATCCAGACC
Downstream 100 bases:
>100_bases TGCGCGTGCGGGCCATCCAGGGCGACACCATCGACGCCATCTGCCGGCGGGTGTACGGCCGCACGGCGAGCGTGACGGAA GCCGTGCTGGCCGCCAACCC
Product: bacteriophage protein
Products: NA
Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion Protein; Phage Head Completion/Stabilization Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Phage-Related Head Completion/Stabilization Protein; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI
Sequences:
>Translated_159_residues MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI >Mature_158_residues SSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTELG AVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17077; Mature: 16946
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC VNDELAAWKAQQLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDAT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEECC >Mature Secondary Structure SSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC VNDELAAWKAQQLAAGFTELGAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDAT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA