Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17546633

Identifier: 17546633

GI number: 17546633

Start: 2094395

End: 2097058

Strand: Reverse

Name: 17546633

Synonym: RSc1914

Alternate gene names: NA

Gene position: 2097058-2094395 (Counterclockwise)

Preceding gene: 17546634

Following gene: 17546632

Centisome position: 56.43

GC content: 68.06

Gene sequence:

>2664_bases
ATGAGCGACGCCCGCCGCCTGCGCCTGGAGGTGGTGCTGGCCGCCGTGGACAAGGCCACGCGGCCGCTGCGCAACCTGAT
GAACGCCAACAACGACCTGGCCCGGGCCGTGAAGGCCACGCGCGCGCAGCTCAAGGACCTGGAACGCACACAGGCCAGCA
TCGACACCTTCCGCAAGCTGTCGCGGGACGCGGCCATCACCGGCAACCAACTGAAGGCGGTGCGCGGGCGGGCGGATGAG
CTGGCCCGCCAGCTCAAGCAGACCAGCGAGCCATCTGCCGCGCTCTCAAAAGCATTCGAGGCCGCCCGGCGCGAGGCGCA
GGCGCTCAAGTCAAAGCAATCGGAATTGTCTGAAAAACTGCACCAGGTGCGCGGGCGGTTGTCCGAGGCCGGCATCGGCA
CGCAGAGCCTCGCGGAGCACCAGCGTGCGCTCAAGACCCGCATTGCCGAGACCAACCAGCAACTGGAGGCGCAGACCCAG
CGCATGGCGGCCGTGACCGCGCAGCAGCGCCGCATGGCCACCGCGCACCAGGCAGCGGACAAGGTGCGTGCCAAGGCCGG
CAGCCTGGCCGCCGCCGGCGCGGGCGCCACCGCAGCCGGCGTGGCGGCCGGTGCTCCGTTGCTCAAGGGCCTGGGGGAAG
CCAAGCACTACGACCTGGAGAAGTTGCGCATTGGCGCGCTGGGCCTGGGTGACCAGTCGACCAAGGAAGCGCTGGCGTTC
GCGCAGCAGATGAAGGCGTACGGCGTCAGCCAGGTTGAGAAGGCCGAACTGATGCGCGACGCCATGAGCGTGTTCGCGGA
CACCCACCACGCCGAAATGGTGATGCCGACGCTCGCCAAGATGAAGTTCGCCAACGCGGCCGTGTTCGGCCAGGCCGAGG
GCGCGGAGAACGAGCGCAAGTTCGTGGACATGCTCAAGGTCATTGAGCTGCGCGGCGGCTTGGCAAGCGAGGCCGAGTTC
AAGAAGCAGGCCGACATGGTCCAGAAGGTCATCACGGCGACCGGCGGGCGCGTGCAGGCTGACGAATGGCTCAACGTCAT
TAAGACAGGTGGCCTCGCCGCCAAGGGCGCCGATGACAAGGCGTTCTACTACACGCTGGAACCGCTGGTGCAGGAGATGG
GCGGCAACCGCGTGGGCACCGCCATGATGAGCGCCTATCAGAACCTGTACCAAGGCAAGACGACGAAGCGGGCGCTGCAC
AACCTGGACAAGTTCGGCCTGATCGCCGACCGGAGCAAGGTGCAGGAGGACAAGGCCGGCCAGGTGTCGTTCATGGACCC
GGGCGCACTCAAGGGCGCGGACCTGTTCCGGCAGAACCAGTTCGCCTGGTTGGAGCAGGTGCTGCTGCCGACGCTGGCTG
CCAAGGGGATCACCCGTCGCAAGCAGATCGAGGACGCAATCGGCAGCGTCTTTTCGAACCGCACGGCGTCGGGCCTGTTC
GCGCAGATGTACATGCAGCGGGAACAGATCCACAAGAACATGCGCCTGAACGAAGGCGCTGCCGGCATCGATCAGCTTGA
AGCCACTGCAAAGGGCACTGCCCAAGGCCAGGAGCTGGACACGCTGGCGAAGGTGCACGACCTGGAGAAGGCGCTGGGCG
AAAAGGTGTTGCCGCTGTATGCGCGCGGCCTGGAACTGGTCGGCAAGGCCGCCGAGGGCGTCACCTCGTTCATGCAGAAC
CACCCAACGCTGGCCAAGGCCGTCGCCGTCGCGGTCGGCGCGCTGGCGGCTTCCCTGCTGGTGCTGGGGCCGATCATGCT
GGCCGTGGCGTCCGTGCTGGGGCCCTACGCCATGCTGCACATCTTGTGCGCCAGGCTGGGCGTTACGGGCGGCGTGCTGT
CGGGCGTGTTGCGTGGTCTGGCGGGTGCCTTCAGCGTAGTCATGCGCGCCGTGGCGGTGCTGGGCCGGGTGCTGCTGATG
AACCCGATTGGCCTGCTGGTGACGGCAATTGCGGTCGCGGCCTACCTGATCTACCGGAACTGGGAGCCGATCAGCGAGTT
CTTCTCGGGGTTGTGGCAGCAGGTGAAGACGGCGTTCGACGGCGGTATCGCCGGCGTGTCCGCGCTGATCCTGAACTGGT
CGCCGGCAGGCCTGTTCTACGCCGCGCTCGCGCCGGTGTTGCAGTGGTTCGGGTTCGACGTGCCGGCCAAGTTCACCGAG
TTCGGCGCCAACATCGTGCAGGGCCTGGCCAACGGCATCCGCAGCGCCATCGGCTGGGTCACGGATGCCGTGGGCAGCGT
GGCAAGCGGTGCGATCGCGGCCTTCAAGAGCCTGATGGGCATCCACTCGCCGTCCCGCGTCTTCGCCGAGTTGGGCGGGT
TCACCATGGCCGGGCTCGGCGAAGGCCTCACGCGCGGTCAGGAGGGGCCGCTGCAGGCCGTTCAGCGGGTGGCCGCCAGG
ATGACCGGTATCGGCGCCGGCATCGCCATCGGTGCGGCGCCGGCCGTCGCATCGCCGGTGCGCTTCGACACCCGGCCGCC
GCTGGCCGCCAGCTCGGTCTCTGGCACCGCGGCGCCGGCTGCCGCCGCGCCCATCACCATCGTCATCAACCCGCCGGCGG
GTAGCGATGAACGGCTGATTGCGCGCCTGGTGGAAGACCGGCTGCGCCAGATCGAGAACCAACGCGCGGCGCGTGGACGC
TCGCGCCTCACCGATACGGATTGA

Upstream 100 bases:

>100_bases
GCGTGATTTTCTCGTTCCGCCTGGAGGAGCTGTACGCCATGGGCATCGTGGAGCTGATGGAGTGGCGCGAGCGCGCACGC
GAACGTAGCGGGGCCGAGGA

Downstream 100 bases:

>100_bases
CCATGATGATGGCACTGGGGCTGTTTGTGTTCAGCCTGGACACGGCCCCCTACCAGGAGTTTCAGCGCCAGGTCGGCTGG
CGGCACCCGTCGAACAACCG

Product: phage-related tail transmembrane protein

Products: NA

Alternate protein names: Phage Tail Protein; Bacteriophage Tail Protein; Phage-Related Membrane Protein; Phage-Related Tail Protein; Phage-Related Tail Transmembrane Protein; Phage Membrane Protein; Phage Tail Tape Measure Protein Family; Bacteriophage P2 Tail Protein GPT; Tail Length Tape Measure Protein; Phage Tail Tape Measure Core Region; Phage Tail Fiber Protein; Prophage; Phage TMP Domain-Containing Protein; Phage-Encoded Membrane Protein; Prophage Tail Length Determinator; Phage Tail-Like Protein; Phage Minor Tail Protein; Tail Fiber Protein T; Gp29 Bacteriophage Membrane Protein; Bacteriophage Protein; Bacteriophage-Related Tail Transmembrane Protein; Fels-2 Prophage Protein; Bacteriophage Membrane Protein; Bacteriophage P2 Tail Protein GpT; Bacteriophage V Tail Protein; Phage Tail Tape-Measure Protein; Bacteriophage Tail Protein/Phage Tail Tape Measure Protein; Myosin Heavy Chain Striated; Phage Tail Tape Measure Protein Core Region

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSDARRLRLEVVLAAVDKATRPLRNLMNANNDLARAVKATRAQLKDLERTQASIDTFRKLSRDAAITGNQLKAVRGRADE
LARQLKQTSEPSAALSKAFEAARREAQALKSKQSELSEKLHQVRGRLSEAGIGTQSLAEHQRALKTRIAETNQQLEAQTQ
RMAAVTAQQRRMATAHQAADKVRAKAGSLAAAGAGATAAGVAAGAPLLKGLGEAKHYDLEKLRIGALGLGDQSTKEALAF
AQQMKAYGVSQVEKAELMRDAMSVFADTHHAEMVMPTLAKMKFANAAVFGQAEGAENERKFVDMLKVIELRGGLASEAEF
KKQADMVQKVITATGGRVQADEWLNVIKTGGLAAKGADDKAFYYTLEPLVQEMGGNRVGTAMMSAYQNLYQGKTTKRALH
NLDKFGLIADRSKVQEDKAGQVSFMDPGALKGADLFRQNQFAWLEQVLLPTLAAKGITRRKQIEDAIGSVFSNRTASGLF
AQMYMQREQIHKNMRLNEGAAGIDQLEATAKGTAQGQELDTLAKVHDLEKALGEKVLPLYARGLELVGKAAEGVTSFMQN
HPTLAKAVAVAVGALAASLLVLGPIMLAVASVLGPYAMLHILCARLGVTGGVLSGVLRGLAGAFSVVMRAVAVLGRVLLM
NPIGLLVTAIAVAAYLIYRNWEPISEFFSGLWQQVKTAFDGGIAGVSALILNWSPAGLFYAALAPVLQWFGFDVPAKFTE
FGANIVQGLANGIRSAIGWVTDAVGSVASGAIAAFKSLMGIHSPSRVFAELGGFTMAGLGEGLTRGQEGPLQAVQRVAAR
MTGIGAGIAIGAAPAVASPVRFDTRPPLAASSVSGTAAPAAAAPITIVINPPAGSDERLIARLVEDRLRQIENQRAARGR
SRLTDTD

Sequences:

>Translated_887_residues
MSDARRLRLEVVLAAVDKATRPLRNLMNANNDLARAVKATRAQLKDLERTQASIDTFRKLSRDAAITGNQLKAVRGRADE
LARQLKQTSEPSAALSKAFEAARREAQALKSKQSELSEKLHQVRGRLSEAGIGTQSLAEHQRALKTRIAETNQQLEAQTQ
RMAAVTAQQRRMATAHQAADKVRAKAGSLAAAGAGATAAGVAAGAPLLKGLGEAKHYDLEKLRIGALGLGDQSTKEALAF
AQQMKAYGVSQVEKAELMRDAMSVFADTHHAEMVMPTLAKMKFANAAVFGQAEGAENERKFVDMLKVIELRGGLASEAEF
KKQADMVQKVITATGGRVQADEWLNVIKTGGLAAKGADDKAFYYTLEPLVQEMGGNRVGTAMMSAYQNLYQGKTTKRALH
NLDKFGLIADRSKVQEDKAGQVSFMDPGALKGADLFRQNQFAWLEQVLLPTLAAKGITRRKQIEDAIGSVFSNRTASGLF
AQMYMQREQIHKNMRLNEGAAGIDQLEATAKGTAQGQELDTLAKVHDLEKALGEKVLPLYARGLELVGKAAEGVTSFMQN
HPTLAKAVAVAVGALAASLLVLGPIMLAVASVLGPYAMLHILCARLGVTGGVLSGVLRGLAGAFSVVMRAVAVLGRVLLM
NPIGLLVTAIAVAAYLIYRNWEPISEFFSGLWQQVKTAFDGGIAGVSALILNWSPAGLFYAALAPVLQWFGFDVPAKFTE
FGANIVQGLANGIRSAIGWVTDAVGSVASGAIAAFKSLMGIHSPSRVFAELGGFTMAGLGEGLTRGQEGPLQAVQRVAAR
MTGIGAGIAIGAAPAVASPVRFDTRPPLAASSVSGTAAPAAAAPITIVINPPAGSDERLIARLVEDRLRQIENQRAARGR
SRLTDTD
>Mature_886_residues
SDARRLRLEVVLAAVDKATRPLRNLMNANNDLARAVKATRAQLKDLERTQASIDTFRKLSRDAAITGNQLKAVRGRADEL
ARQLKQTSEPSAALSKAFEAARREAQALKSKQSELSEKLHQVRGRLSEAGIGTQSLAEHQRALKTRIAETNQQLEAQTQR
MAAVTAQQRRMATAHQAADKVRAKAGSLAAAGAGATAAGVAAGAPLLKGLGEAKHYDLEKLRIGALGLGDQSTKEALAFA
QQMKAYGVSQVEKAELMRDAMSVFADTHHAEMVMPTLAKMKFANAAVFGQAEGAENERKFVDMLKVIELRGGLASEAEFK
KQADMVQKVITATGGRVQADEWLNVIKTGGLAAKGADDKAFYYTLEPLVQEMGGNRVGTAMMSAYQNLYQGKTTKRALHN
LDKFGLIADRSKVQEDKAGQVSFMDPGALKGADLFRQNQFAWLEQVLLPTLAAKGITRRKQIEDAIGSVFSNRTASGLFA
QMYMQREQIHKNMRLNEGAAGIDQLEATAKGTAQGQELDTLAKVHDLEKALGEKVLPLYARGLELVGKAAEGVTSFMQNH
PTLAKAVAVAVGALAASLLVLGPIMLAVASVLGPYAMLHILCARLGVTGGVLSGVLRGLAGAFSVVMRAVAVLGRVLLMN
PIGLLVTAIAVAAYLIYRNWEPISEFFSGLWQQVKTAFDGGIAGVSALILNWSPAGLFYAALAPVLQWFGFDVPAKFTEF
GANIVQGLANGIRSAIGWVTDAVGSVASGAIAAFKSLMGIHSPSRVFAELGGFTMAGLGEGLTRGQEGPLQAVQRVAARM
TGIGAGIAIGAAPAVASPVRFDTRPPLAASSVSGTAAPAAAAPITIVINPPAGSDERLIARLVEDRLRQIENQRAARGRS
RLTDTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94107; Mature: 93975

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDARRLRLEVVLAAVDKATRPLRNLMNANNDLARAVKATRAQLKDLERTQASIDTFRKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDAAITGNQLKAVRGRADELARQLKQTSEPSAALSKAFEAARREAQALKSKQSELSEKL
HHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVRGRLSEAGIGTQSLAEHQRALKTRIAETNQQLEAQTQRMAAVTAQQRRMATAHQAAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRAKAGSLAAAGAGATAAGVAAGAPLLKGLGEAKHYDLEKLRIGALGLGDQSTKEALAF
HHHHHHCCCHHCCCCCHHHHHHHCCHHHHHCCHHHCCCHHHHHCCCCCCCCCHHHHHHHH
AQQMKAYGVSQVEKAELMRDAMSVFADTHHAEMVMPTLAKMKFANAAVFGQAEGAENERK
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FVDMLKVIELRGGLASEAEFKKQADMVQKVITATGGRVQADEWLNVIKTGGLAAKGADDK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCC
AFYYTLEPLVQEMGGNRVGTAMMSAYQNLYQGKTTKRALHNLDKFGLIADRSKVQEDKAG
HHEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
QVSFMDPGALKGADLFRQNQFAWLEQVLLPTLAAKGITRRKQIEDAIGSVFSNRTASGLF
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
AQMYMQREQIHKNMRLNEGAAGIDQLEATAKGTAQGQELDTLAKVHDLEKALGEKVLPLY
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGLELVGKAAEGVTSFMQNHPTLAKAVAVAVGALAASLLVLGPIMLAVASVLGPYAMLH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILCARLGVTGGVLSGVLRGLAGAFSVVMRAVAVLGRVLLMNPIGLLVTAIAVAAYLIYRN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
WEPISEFFSGLWQQVKTAFDGGIAGVSALILNWSPAGLFYAALAPVLQWFGFDVPAKFTE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
FGANIVQGLANGIRSAIGWVTDAVGSVASGAIAAFKSLMGIHSPSRVFAELGGFTMAGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
EGLTRGQEGPLQAVQRVAARMTGIGAGIAIGAAPAVASPVRFDTRPPLAASSVSGTAAPA
HHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
AAAPITIVINPPAGSDERLIARLVEDRLRQIENQRAARGRSRLTDTD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDARRLRLEVVLAAVDKATRPLRNLMNANNDLARAVKATRAQLKDLERTQASIDTFRKL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRDAAITGNQLKAVRGRADELARQLKQTSEPSAALSKAFEAARREAQALKSKQSELSEKL
HHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQVRGRLSEAGIGTQSLAEHQRALKTRIAETNQQLEAQTQRMAAVTAQQRRMATAHQAAD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRAKAGSLAAAGAGATAAGVAAGAPLLKGLGEAKHYDLEKLRIGALGLGDQSTKEALAF
HHHHHHCCCHHCCCCCHHHHHHHCCHHHHHCCHHHCCCHHHHHCCCCCCCCCHHHHHHHH
AQQMKAYGVSQVEKAELMRDAMSVFADTHHAEMVMPTLAKMKFANAAVFGQAEGAENERK
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FVDMLKVIELRGGLASEAEFKKQADMVQKVITATGGRVQADEWLNVIKTGGLAAKGADDK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCC
AFYYTLEPLVQEMGGNRVGTAMMSAYQNLYQGKTTKRALHNLDKFGLIADRSKVQEDKAG
HHEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
QVSFMDPGALKGADLFRQNQFAWLEQVLLPTLAAKGITRRKQIEDAIGSVFSNRTASGLF
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
AQMYMQREQIHKNMRLNEGAAGIDQLEATAKGTAQGQELDTLAKVHDLEKALGEKVLPLY
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGLELVGKAAEGVTSFMQNHPTLAKAVAVAVGALAASLLVLGPIMLAVASVLGPYAMLH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILCARLGVTGGVLSGVLRGLAGAFSVVMRAVAVLGRVLLMNPIGLLVTAIAVAAYLIYRN
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
WEPISEFFSGLWQQVKTAFDGGIAGVSALILNWSPAGLFYAALAPVLQWFGFDVPAKFTE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
FGANIVQGLANGIRSAIGWVTDAVGSVASGAIAAFKSLMGIHSPSRVFAELGGFTMAGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
EGLTRGQEGPLQAVQRVAARMTGIGAGIAIGAAPAVASPVRFDTRPPLAASSVSGTAAPA
HHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
AAAPITIVINPPAGSDERLIARLVEDRLRQIENQRAARGRSRLTDTD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA