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The map label for this gene is 17546623

Identifier: 17546623

GI number: 17546623

Start: 2089949

End: 2090197

Strand: Reverse

Name: 17546623

Synonym: RSc1904

Alternate gene names: NA

Gene position: 2090197-2089949 (Counterclockwise)

Preceding gene: 17546625

Following gene: 17546622

Centisome position: 56.24

GC content: 64.26

Gene sequence:

>249_bases
ATGAAAATCAAATGCCCGCACTGCGGTTCGCGCATGCACATCCGCAGCAGCCGTGAGATGACTCTGTTGTCTCGTGAGCT
GTACGTGCAGTGCCCCAACGTGGAATGCGCCTACACCTGCGCCGCGATCCTGTCCGCCGTGCGCACCATCGCGCCGAGCA
TGCAGCCGAACCCCAAGGCCTATCTCCCTGTCGGGCGCGCCCGCTTGCTGCCCGAAAACACGCGCCAGCTCGACCTGCTG
CCCGGCTAA

Upstream 100 bases:

>100_bases
TGACCCGAAAGTATCTGGATGCTGTTGCCACGCTTGGCGAGGTCGGCATGTTTTGTGAATGTGCCCGGCAAGGTGCCGGC
GAATGCGGGAGACCCCTGGA

Downstream 100 bases:

>100_bases
CGGCGTAGCCCCCTAATCCTCTTCCCCTCACGTTTTTTTCGCGCCTTGCAAGGCGTGAGGGACTTTTTTTGCCCGAAAAA
CGCCGCCCAAGCGGCTTTGC

Product: transcriptional activator transcription regulator protein

Products: NA

Alternate protein names: Bacteriophage Transcriptional Activator; Transcriptional Activator Transcription Regulator Protein; Phage Transcriptional Activator Ogr/Delta

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKAYLPVGRARLLPENTRQLDLL
PG

Sequences:

>Translated_82_residues
MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKAYLPVGRARLLPENTRQLDLL
PG
>Mature_82_residues
MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKAYLPVGRARLLPENTRQLDLL
PG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9168; Mature: 9168

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKA
CCCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
YLPVGRARLLPENTRQLDLLPG
ECCCCCEECCCCCCCEEECCCC
>Mature Secondary Structure
MKIKCPHCGSRMHIRSSREMTLLSRELYVQCPNVECAYTCAAILSAVRTIAPSMQPNPKA
CCCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE
YLPVGRARLLPENTRQLDLLPG
ECCCCCEECCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA