| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546622
Identifier: 17546622
GI number: 17546622
Start: 2089601
End: 2089834
Strand: Reverse
Name: 17546622
Synonym: RSc1903
Alternate gene names: NA
Gene position: 2089834-2089601 (Counterclockwise)
Preceding gene: 17546623
Following gene: 17546621
Centisome position: 56.23
GC content: 59.83
Gene sequence:
>234_bases ATGCCAACCATTCACACCTCCCTGTGCCAGGCCAAAAGAGTCGAAGTCGGACCTGTGCGCTTCGACAAGTTTGTCTACAA CGACGCAACGCGAGTTTTCGCCACGCAGGACATCACCATCTGCATTGAAGGTGGCTCCCCCGTCAAGTTGACAATCCACC TCGGGGAAGGCTGCACGGCCTTGGCCGCCGGCGAAGCCGTTGTGCTTCCCCTGCCCGAAGAGGTGGGCGCATGA
Upstream 100 bases:
>100_bases AATCCTCTTCCCCTCACGTTTTTTTCGCGCCTTGCAAGGCGTGAGGGACTTTTTTTGCCCGAAAAACGCCGCCCAAGCGG CTTTGCCTTGGAGTTCCGCC
Downstream 100 bases:
>100_bases AGCCCTTCCTCGTGCACGTCGCCGCCGGTGGCCGGCGCCTGTCTGTCCCTACCTTCGCTGCGTCGAGCTTCGACGCAATC GTTCGCGTGCTGGGCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPTIHTSLCQAKRVEVGPVRFDKFVYNDATRVFATQDITICIEGGSPVKLTIHLGEGCTALAAGEAVVLPLPEEVGA
Sequences:
>Translated_77_residues MPTIHTSLCQAKRVEVGPVRFDKFVYNDATRVFATQDITICIEGGSPVKLTIHLGEGCTALAAGEAVVLPLPEEVGA >Mature_76_residues PTIHTSLCQAKRVEVGPVRFDKFVYNDATRVFATQDITICIEGGSPVKLTIHLGEGCTALAAGEAVVLPLPEEVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8154; Mature: 8022
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIHTSLCQAKRVEVGPVRFDKFVYNDATRVFATQDITICIEGGSPVKLTIHLGEGCTA CCCCCCCCCCCCCCEECCEEEEEEEECCCEEEEEECCEEEEEECCCCEEEEEEECCCCEE LAAGEAVVLPLPEEVGA EECCCEEEEECCHHHCC >Mature Secondary Structure PTIHTSLCQAKRVEVGPVRFDKFVYNDATRVFATQDITICIEGGSPVKLTIHLGEGCTA CCCCCCCCCCCCCEECCEEEEEEEECCCEEEEEECCEEEEEECCCCEEEEEEECCCCEE LAAGEAVVLPLPEEVGA EECCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA