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The map label for this gene is dppC2 [H]

Identifier: 17546602

GI number: 17546602

Start: 2066937

End: 2067872

Strand: Direct

Name: dppC2 [H]

Synonym: RSc1883

Alternate gene names: 17546602

Gene position: 2066937-2067872 (Clockwise)

Preceding gene: 17546601

Following gene: 17546603

Centisome position: 55.62

GC content: 71.05

Gene sequence:

>936_bases
ATGAGCACGTCCCCGCAGACCGCCGCGCCCGCCCGGGCCGGCGCCGGCCCCGCGCCGCGCAGGCAGTCGCCATGGCGGCG
CGTGGCGGCGGATTTCGTGACCTCGAAAACCGCCGTGTTCGGCCTCGCCGTCATCGTGCTGCTGGCAGCGGCGGCGCTGG
CGGCGCCGTGGATCACGCCGCAGAACCCCTACGATCTGATGCAGCTGGACGTACTGGACGCGCGCCTGGCGCCGGGCTCG
CCCAACGGCGCGGGCACCTTCACGTACTGGCTCGGCACCGACGGCCAGGGGCGCGATCTCTATTCGGGCATGCTCTACGG
GCTGCGCATCAGCCTGGGCGTGGGGATCGGCTCGGCCGCCGTGGCAGCGGTGATCGGCACGCTGCTGGGGCTGATCGCGG
CCTACGCGGGCGGCAAGGTCGACAGCCTGATCATGCGCACGGTGGACCTGCTGCTGTCGTTCCCGTCGGTGCTGGTGGCG
ATGATGATCCTCGCCTACCTCGGCAAGAGCATCGCCAACGTGGTGATGACGCTGGTGCTGCTGGAATGGGCGTACTACGC
GCGCACCGTGCGCGGCCAGGCGCTGGTCGAGCGCCGCCGCGAATACGTGGAGGCGGCGCGCTCGCTCGCCCTGCCCGGCT
GGCGCATCGCGCTCCGGCACATCCTGCCCAACTGCCTGCCGCCGCTGATCGTGGTGGGCACGCTGCAGGTGGCACGCGCG
ATCACGCTGGAGGCGACGCTGTCGTTCCTGGGCCTGGGCGTGCCGATCACCGAGCCGTCGCTGGGCCTGCTGATTGCCAA
CGGCTACCAATACATGCTGTCGGGCCAGTACTGGATCAGCGTCTATCCGGGCCTCGCGCTGCTGCTGGCGCTGGTCGCCA
TCAACCTGGTGGGCGACCGCCTGCGCGAGGTGCTCAACCCGAGGGCGTACCGATGA

Upstream 100 bases:

>100_bases
TGGTGGTGTGCCTGTTCGTGTCGCTGAACCTGATCGTCGATGTCCTGTATCGCCTGCTCGACCCGCGCGTGCGCGCCGCG
GATGGCATGGAGGCCGCGGC

Downstream 100 bases:

>100_bases
GCGCCGCCGACCCGACGCTGCAGGTGCGCAACCTGCGTACCCATTTCTTCACGCGCGACGGCGTGCTGCCGGCGGTGGAC
GACGTGTCGTTCTCGCTCGG

Product: peptide ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSTSPQTAAPARAGAGPAPRRQSPWRRVAADFVTSKTAVFGLAVIVLLAAAALAAPWITPQNPYDLMQLDVLDARLAPGS
PNGAGTFTYWLGTDGQGRDLYSGMLYGLRISLGVGIGSAAVAAVIGTLLGLIAAYAGGKVDSLIMRTVDLLLSFPSVLVA
MMILAYLGKSIANVVMTLVLLEWAYYARTVRGQALVERRREYVEAARSLALPGWRIALRHILPNCLPPLIVVGTLQVARA
ITLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAINLVGDRLREVLNPRAYR

Sequences:

>Translated_311_residues
MSTSPQTAAPARAGAGPAPRRQSPWRRVAADFVTSKTAVFGLAVIVLLAAAALAAPWITPQNPYDLMQLDVLDARLAPGS
PNGAGTFTYWLGTDGQGRDLYSGMLYGLRISLGVGIGSAAVAAVIGTLLGLIAAYAGGKVDSLIMRTVDLLLSFPSVLVA
MMILAYLGKSIANVVMTLVLLEWAYYARTVRGQALVERRREYVEAARSLALPGWRIALRHILPNCLPPLIVVGTLQVARA
ITLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAINLVGDRLREVLNPRAYR
>Mature_310_residues
STSPQTAAPARAGAGPAPRRQSPWRRVAADFVTSKTAVFGLAVIVLLAAAALAAPWITPQNPYDLMQLDVLDARLAPGSP
NGAGTFTYWLGTDGQGRDLYSGMLYGLRISLGVGIGSAAVAAVIGTLLGLIAAYAGGKVDSLIMRTVDLLLSFPSVLVAM
MILAYLGKSIANVVMTLVLLEWAYYARTVRGQALVERRREYVEAARSLALPGWRIALRHILPNCLPPLIVVGTLQVARAI
TLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAINLVGDRLREVLNPRAYR

Specific function: Part of the ABC transporter complex ddpABCDF, which is probably involved in D,D-dipeptide transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=39.8496240601504, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787054, Length=287, Percent_Identity=35.191637630662, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789964, Length=291, Percent_Identity=39.5189003436426, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=34.1463414634146, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1787498, Length=287, Percent_Identity=35.8885017421603, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1788505, Length=219, Percent_Identity=30.1369863013699, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787549, Length=289, Percent_Identity=26.9896193771626, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33142; Mature: 33010

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSPQTAAPARAGAGPAPRRQSPWRRVAADFVTSKTAVFGLAVIVLLAAAALAAPWITP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QNPYDLMQLDVLDARLAPGSPNGAGTFTYWLGTDGQGRDLYSGMLYGLRISLGVGIGSAA
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHH
VAAVIGTLLGLIAAYAGGKVDSLIMRTVDLLLSFPSVLVAMMILAYLGKSIANVVMTLVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEWAYYARTVRGQALVERRREYVEAARSLALPGWRIALRHILPNCLPPLIVVGTLQVARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAINLVGDR
HHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCHHEEHHHHHHHHHHHHHHHHHHHH
LREVLNPRAYR
HHHHHCCCCCC
>Mature Secondary Structure 
STSPQTAAPARAGAGPAPRRQSPWRRVAADFVTSKTAVFGLAVIVLLAAAALAAPWITP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QNPYDLMQLDVLDARLAPGSPNGAGTFTYWLGTDGQGRDLYSGMLYGLRISLGVGIGSAA
CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHH
VAAVIGTLLGLIAAYAGGKVDSLIMRTVDLLLSFPSVLVAMMILAYLGKSIANVVMTLVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEWAYYARTVRGQALVERRREYVEAARSLALPGWRIALRHILPNCLPPLIVVGTLQVARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLEATLSFLGLGVPITEPSLGLLIANGYQYMLSGQYWISVYPGLALLLALVAINLVGDR
HHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCHHEEHHHHHHHHHHHHHHHHHHHH
LREVLNPRAYR
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]