| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546556
Identifier: 17546556
GI number: 17546556
Start: 2008548
End: 2009798
Strand: Reverse
Name: 17546556
Synonym: RSc1837
Alternate gene names: NA
Gene position: 2009798-2008548 (Counterclockwise)
Preceding gene: 17546557
Following gene: 17546555
Centisome position: 54.08
GC content: 69.54
Gene sequence:
>1251_bases ATGCGTCGAATCGCGATTGTGGGCGGTGGCCAGGCCGGCTTGCCGCTGGCCTTTGGGCTGCTGGACAAAGGCTACGAGGT GACCGTCGTCAGCAACCGGACACCGGACGACATCCGCCGCGGCAAGGTCATGTCCAGCCAGTGCATGTTCGATCCGGCAT TGCAGATCGAACGCGAGCTCGGCATCAACGGTTGGGAGGCGGACTGCCCGCCCGTCGAGGGCATCGGCTTTGCCGTGCCG CACCCCGAGCAGGCCGGCGCGAAAGCCATCGAATGGAGCGCCCGGCTGGACCGCCCGGCCCAGTCGGTGGACCAGCGCGT CAAGATGCCGGCGTGGCTGGAGCAGGTCCAAGCGCGCGGCGGCCGCCTGCTGCTCCAGGACGCGGGCATCGCCGAACTCG AAGCGCTGGCGCAAAGCCATGACCTGGTCATCCTCGCCGCCGGCAAGGGCGAGGTGGTCAAGCTGTTCGAGCGCGACGCC GCGCGCTCGCCGTTCGACAAGCCGCAGCGCGCCCTGGCGCTGACCTACGTGCACGGGCTGGAGCCGGCGCCGGATTACTC CCGCGTGGCGTTCAACCTGATTCCCGGCGTGGGCGAGTACTTCGTCTTCCCCGCGCTGACGCTCAGCGGCCCGTGCGACA TCATGGTGTTCGAAGGCGTTCCCGGCGGCCCGCTGGATTGCTGGCGCGACGTGCGCACGCCGCAGGAGCACCTGGCCGCG AGCCGGCGCTTCCTGCAAACCTATCTGCCGTGGGAGGCGGACCGGGCCCGCAATGTCGAGCTGACCGACGACAAGGGCAT TCTGGCCGGTGCGTTCGCGCCGACCGTGCGCAAGCCGGTGATGACGCTGCCGTCCGGCCGCCTGGTGTTCGGCCTGGGCG ATGCCGTGGTCACCAACGACCCGATCACCGGCCAGGGCGCGAACAACGCGACCAAGGCATGCAAGGTCTATCTCGATGCC ATCCTGGCCCGCGGCGAGCAGCCCTACACGCGCGACTGGATGGAAGCGACGTTCGAGCAGTTCTGGGACTACGCCCAATG GGTCGTGCAGTGGACCAACTCGCTGCTGACCCCGCCCCCGCCGCACATCCTCGGCCTGCTGGGCACGGCCGAGCAAGCGC CCTCGCTGGCCAGCACGATCGCGAACGGCTTCAACCACCCGCCGAGCTACTTCCCGTGGTGGGCCGACGCGCAAGCCTGC GAGGGCTTCATCGCGCAGCACCAGCGCACCCCGGCCACGGCTACGGCCTGA
Upstream 100 bases:
>100_bases CGGCGATGGGGCCGGAGCAGGCCAAGCCGGCCATTGCGCGCCTGGCCGAATAACGCAGACCCGCCCGACCGGGCCCGATC TTTCATCAAGGAGAACTCTC
Downstream 100 bases:
>100_bases GGAGGATCCCATGTTGCAATGCCTCGCCCCCGATCCCACCGCCATGAGCGCCAACCACCACCACACCTGGGGCAACGTCG ACCTCGAGCCCAAGGCGCTG
Product: oxygenase subunit protein
Products: NA
Alternate protein names: Oxygenase Subunit; Monooxygenase; Oxidoreductase; Oxygenase; Dehydrogenase/Oxygenase Subunit; FAD Dependent Oxidoreductase; Styrene Monooxygenase; FAD-Dependent Oxiredutase; Monooxygenase Component B; Monooxygenase Subunit
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRRIAIVGGGQAGLPLAFGLLDKGYEVTVVSNRTPDDIRRGKVMSSQCMFDPALQIERELGINGWEADCPPVEGIGFAVP HPEQAGAKAIEWSARLDRPAQSVDQRVKMPAWLEQVQARGGRLLLQDAGIAELEALAQSHDLVILAAGKGEVVKLFERDA ARSPFDKPQRALALTYVHGLEPAPDYSRVAFNLIPGVGEYFVFPALTLSGPCDIMVFEGVPGGPLDCWRDVRTPQEHLAA SRRFLQTYLPWEADRARNVELTDDKGILAGAFAPTVRKPVMTLPSGRLVFGLGDAVVTNDPITGQGANNATKACKVYLDA ILARGEQPYTRDWMEATFEQFWDYAQWVVQWTNSLLTPPPPHILGLLGTAEQAPSLASTIANGFNHPPSYFPWWADAQAC EGFIAQHQRTPATATA
Sequences:
>Translated_416_residues MRRIAIVGGGQAGLPLAFGLLDKGYEVTVVSNRTPDDIRRGKVMSSQCMFDPALQIERELGINGWEADCPPVEGIGFAVP HPEQAGAKAIEWSARLDRPAQSVDQRVKMPAWLEQVQARGGRLLLQDAGIAELEALAQSHDLVILAAGKGEVVKLFERDA ARSPFDKPQRALALTYVHGLEPAPDYSRVAFNLIPGVGEYFVFPALTLSGPCDIMVFEGVPGGPLDCWRDVRTPQEHLAA SRRFLQTYLPWEADRARNVELTDDKGILAGAFAPTVRKPVMTLPSGRLVFGLGDAVVTNDPITGQGANNATKACKVYLDA ILARGEQPYTRDWMEATFEQFWDYAQWVVQWTNSLLTPPPPHILGLLGTAEQAPSLASTIANGFNHPPSYFPWWADAQAC EGFIAQHQRTPATATA >Mature_416_residues MRRIAIVGGGQAGLPLAFGLLDKGYEVTVVSNRTPDDIRRGKVMSSQCMFDPALQIERELGINGWEADCPPVEGIGFAVP HPEQAGAKAIEWSARLDRPAQSVDQRVKMPAWLEQVQARGGRLLLQDAGIAELEALAQSHDLVILAAGKGEVVKLFERDA ARSPFDKPQRALALTYVHGLEPAPDYSRVAFNLIPGVGEYFVFPALTLSGPCDIMVFEGVPGGPLDCWRDVRTPQEHLAA SRRFLQTYLPWEADRARNVELTDDKGILAGAFAPTVRKPVMTLPSGRLVFGLGDAVVTNDPITGQGANNATKACKVYLDA ILARGEQPYTRDWMEATFEQFWDYAQWVVQWTNSLLTPPPPHILGLLGTAEQAPSLASTIANGFNHPPSYFPWWADAQAC EGFIAQHQRTPATATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45390; Mature: 45390
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIAIVGGGQAGLPLAFGLLDKGYEVTVVSNRTPDDIRRGKVMSSQCMFDPALQIEREL CCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHCCCHHHHHHHHH GINGWEADCPPVEGIGFAVPHPEQAGAKAIEWSARLDRPAQSVDQRVKMPAWLEQVQARG CCCCCCCCCCCCCCCCCCCCCCHHCCCHHEEHHHHCCCHHHHHHHHCCCHHHHHHHHHCC GRLLLQDAGIAELEALAQSHDLVILAAGKGEVVKLFERDAARSPFDKPQRALALTYVHGL CEEEEECCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHCCCCCCCCHHHHEEEHHHHCC EPAPDYSRVAFNLIPGVGEYFVFPALTLSGPCDIMVFEGVPGGPLDCWRDVRTPQEHLAA CCCCCHHHHHHHHCCCCCHHHHHHCEEECCCCCEEEECCCCCCHHHHHHHCCCCHHHHHH SRRFLQTYLPWEADRARNVELTDDKGILAGAFAPTVRKPVMTLPSGRLVFGLGDAVVTND HHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCHHHHCCCEECCCCCEEEECCCEEEECC PITGQGANNATKACKVYLDAILARGEQPYTRDWMEATFEQFWDYAQWVVQWTNSLLTPPP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PHILGLLGTAEQAPSLASTIANGFNHPPSYFPWWADAQACEGFIAQHQRTPATATA HHHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRRIAIVGGGQAGLPLAFGLLDKGYEVTVVSNRTPDDIRRGKVMSSQCMFDPALQIEREL CCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHCCCHHHHHHHHH GINGWEADCPPVEGIGFAVPHPEQAGAKAIEWSARLDRPAQSVDQRVKMPAWLEQVQARG CCCCCCCCCCCCCCCCCCCCCCHHCCCHHEEHHHHCCCHHHHHHHHCCCHHHHHHHHHCC GRLLLQDAGIAELEALAQSHDLVILAAGKGEVVKLFERDAARSPFDKPQRALALTYVHGL CEEEEECCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHCCCCCCCCHHHHEEEHHHHCC EPAPDYSRVAFNLIPGVGEYFVFPALTLSGPCDIMVFEGVPGGPLDCWRDVRTPQEHLAA CCCCCHHHHHHHHCCCCCHHHHHHCEEECCCCCEEEECCCCCCHHHHHHHCCCCHHHHHH SRRFLQTYLPWEADRARNVELTDDKGILAGAFAPTVRKPVMTLPSGRLVFGLGDAVVTND HHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCHHHHCCCEECCCCCEEEECCCEEEECC PITGQGANNATKACKVYLDAILARGEQPYTRDWMEATFEQFWDYAQWVVQWTNSLLTPPP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PHILGLLGTAEQAPSLASTIANGFNHPPSYFPWWADAQACEGFIAQHQRTPATATA HHHHHHHCCHHHCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA