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The map label for this gene is 17546539

Identifier: 17546539

GI number: 17546539

Start: 1989576

End: 1990199

Strand: Direct

Name: 17546539

Synonym: RSc1820

Alternate gene names: NA

Gene position: 1989576-1990199 (Clockwise)

Preceding gene: 17546538

Following gene: 17546551

Centisome position: 53.53

GC content: 67.79

Gene sequence:

>624_bases
ATGTGCACTGACGACGTTTTCAGCTACCCGATACAGGCCGGTCACGGCCTGCCGCATGACCCCATTCCCGCGATTCTCGG
GCCGCGGCCGATCGGCTGGATTTCCACGCGCGATGCCGAGGGCCGGCTCAATCTGGCGCCGTACAGCTTCTTCAATATCT
TCAACTACAAGCCGCCGCTGGTCGCGTTCTCGAGCGTCGGCAAGAAGGACAGCGTGCGCAATGCCGAAGCGACCGGCGAG
TTCGTCTACAACCTCGCGACGCGCCCGCTGGCGGAGCAGGTCAACCAGACCAGCATCGACGCGCCGCCGGGTATCGACGA
GTTCGCGCTGGCCGGCCTGACGCCCGCGCGCTGCATCGAGGTGGCCGCGCCGCGCGTGGCGCAGAGCCCGGTCTCGCTCG
AGTGCAAGGTGACGCAGGTGCAGCAGCTGGCCGGCATCGACGGGGTGGCGCTGAATACGTGGATGGTCTTCGGCGAAGTC
GTCGCGGTGCACATCGACCGCGCGCTGCTGCGGGACGGCATCTACGACACCGCCGCGGCCCAGCCGATTCTGCGCGCCGG
CGGGCCCGCCGACTACTTCGAGGTCTTGCCGCAGGGACGCTTCAGGATGTACCGGCCGAGATAG

Upstream 100 bases:

>100_bases
CCGGTTCTGGCCGATTGTCGGCCGTACCGCGCCTGCCCGTGCGCCGGTTGCGGTAAGTTGGCGGCAACGCGATTCCGCAA
GCCCGCAGCATCCCTGGCAC

Downstream 100 bases:

>100_bases
GCGGCCGGGCTCAGTCCTGGGGGGCGTGCCGGCTGATGAGCTCGTGCAGGATGTCCTTGAGCGTATCGATTTTCTGCTGG
CTCATGGGCTCCAGGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MCTDDVFSYPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGKKDSVRNAEATGE
FVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIEVAAPRVAQSPVSLECKVTQVQQLAGIDGVALNTWMVFGEV
VAVHIDRALLRDGIYDTAAAQPILRAGGPADYFEVLPQGRFRMYRPR

Sequences:

>Translated_207_residues
MCTDDVFSYPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGKKDSVRNAEATGE
FVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIEVAAPRVAQSPVSLECKVTQVQQLAGIDGVALNTWMVFGEV
VAVHIDRALLRDGIYDTAAAQPILRAGGPADYFEVLPQGRFRMYRPR
>Mature_207_residues
MCTDDVFSYPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGKKDSVRNAEATGE
FVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIEVAAPRVAQSPVSLECKVTQVQQLAGIDGVALNTWMVFGEV
VAVHIDRALLRDGIYDTAAAQPILRAGGPADYFEVLPQGRFRMYRPR

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22509; Mature: 22509

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTDDVFSYPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPL
CCCCHHHHCCHHCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEEECCHHHHHHCCCCCCH
VAFSSVGKKDSVRNAEATGEFVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIE
HHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHH
VAAPRVAQSPVSLECKVTQVQQLAGIDGVALNTWMVFGEVVAVHIDRALLRDGIYDTAAA
HHCCHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QPILRAGGPADYFEVLPQGRFRMYRPR
CHHHHCCCCHHHHHHCCCCCEEECCCC
>Mature Secondary Structure
MCTDDVFSYPIQAGHGLPHDPIPAILGPRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPL
CCCCHHHHCCHHCCCCCCCCCCCHHCCCCCCCEEECCCCCCEEEECCHHHHHHCCCCCCH
VAFSSVGKKDSVRNAEATGEFVYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIE
HHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHH
VAAPRVAQSPVSLECKVTQVQQLAGIDGVALNTWMVFGEVVAVHIDRALLRDGIYDTAAA
HHCCHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QPILRAGGPADYFEVLPQGRFRMYRPR
CHHHHCCCCHHHHHHCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]